Evidence map›Paper›PMID 31368592›Full record

ArticleThe EMBO journal2019

Rebuilding core abscisic acid signaling pathways of Arabidopsis in yeast.

Moritz Ruschhaupt, Julia Mergner, Stefanie Mucha, Michael Papacek, Isabel Doch, Stefanie V Tischer, Daniel Hemmler, David Chiasson, Kai H Edel, Jörg Kudla and 3 more

Abstract read
In one paragraph

Article in The EMBO journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Reconstitution of phytochrome A-mediated light modulation of the ABA signaling pathways in yeast.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  8. Article
  9. The Systems and Synthetic Biology of Auxin.Cold Spring Harbor perspectives in biology · 2022
    Review
  10. Article
  11. Review
  12. Review
  13. Reconstitution of Cytokinin Signaling in Rice Protoplasts.International journal of molecular sciences · 2021
    Article
  14. Signaling mechanisms in abscisic acid-mediated stomatal closure.The Plant journal : for cell and molecular biology · 2021
    Review
  15. Review
  16. Induction of Jasmonoyl-Isoleucine (JA-Ile)-DependentPlants (Basel, Switzerland) · 2020
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors.

Moritz RuschhauptChair of Botany, TUM School of Life Sciences Weihenstephan, Technical University Munich, Freising, Germany.ORCID 0000-0003-3011-0705
Julia MergnerChair of Proteomics and Bioanalytics, TUM School of Life Sciences Weihenstephan, Technical University Munich, Freising, Germany.
Stefanie MuchaChair of Botany, TUM School of Life Sciences Weihenstephan, Technical University Munich, Freising, Germany.ORCID 0000-0002-6382-7035
Michael PapacekChair of Botany, TUM School of Life Sciences Weihenstephan, Technical University Munich, Freising, Germany.
Isabel DochChair of Botany, TUM School of Life Sciences Weihenstephan, Technical University Munich, Freising, Germany.
Stefanie V TischerChair of Botany, TUM School of Life Sciences Weihenstephan, Technical University Munich, Freising, Germany.
Daniel HemmlerResearch Unit Analytical BioGeoChemistry (BGC), German Research Center for Environmental Health, Helmholtz Zentrum München, Neuherberg, Germany.ORCID 0000-0003-2540-0054
David ChiassonFaculty of Biology, Institute of Genetics, Ludwig Maximilian University of Munich, Munich, Germany.ORCID 0000-0002-0770-2684
Kai H EdelInstitut für Biologie und Biotechnologie der Pflanzen, Universität Münster, Münster, Germany.
Jörg KudlaInstitut für Biologie und Biotechnologie der Pflanzen, Universität Münster, Münster, Germany.
Philippe Schmitt-KopplinResearch Unit Analytical BioGeoChemistry (BGC), German Research Center for Environmental Health, Helmholtz Zentrum München, Neuherberg, Germany.
Bernhard KusterChair of Proteomics and Bioanalytics, TUM School of Life Sciences Weihenstephan, Technical University Munich, Freising, Germany.ORCID 0000-0002-9094-1677
Erwin GrillChair of Botany, TUM School of Life Sciences Weihenstephan, Technical University Munich, Freising, Germany.ORCID 0000-0003-4036-766X

Funding

Deutsche Forschungsgemeinschaft (DFG) GR938Deutsche Forschungsgemeinschaft (DFG) SFB924
6 · The paper itself

Abstract

The phytohormone abscisic acid (ABA) regulates plant responses to abiotic stress, such as drought and high osmotic conditions. The multitude of functionally redundant components involved in ABA signaling poses a major challenge for elucidating individual contributions to the response selectivity and sensitivity of the pathway. Here, we reconstructed single ABA signaling pathways in yeast for combinatorial analysis of ABA receptors and coreceptors, downstream-acting SnRK2 protein kinases, and transcription factors. The analysis shows that some ABA receptors stimulate the pathway even in the absence of ABA and that SnRK2s are major determinants of ABA responsiveness by differing in the ligand-dependent control. Five SnRK2s, including SnRK2.4 known to be active under osmotic stress in plants, activated ABA-responsive transcription factors and were regulated by ABA receptor complexes in yeast. In the plant tissue, SnRK2.4 and ABA receptors competed for coreceptor interaction in an ABA-dependent manner consistent with a tight integration of SnRK2.4 into the ABA signaling pathway. The study establishes the suitability of the yeast system for the dissection of core signaling cascades and opens up future avenues of research on ligand-receptor regulation.

Indexed as

Abscisic AcidArabidopsisArabidopsis ProteinsBiosynthetic PathwaysGene Expression Regulation, PlantOsmotic PressurePhosphorylationProtein EngineeringProtein Serine-Threonine KinasesYeastsAbscisic AcidArabidopsis ProteinsProtein Serine-Threonine KinasesSnRK2 protein, ArabidopsisABFabiotic stressabscisic acidclade A PP2CRCAR/PYL/PYR1SnRK2

Identifiers

PMID31368592
PMCPMC6717914

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.