Evidence map›Paper›PMID 31367223›Full record

ArticlePlant methods2019

Flowers, leaves or both? How to obtain suitable images for automated plant identification.

Michael Rzanny, Patrick Mäder, Alice Deggelmann, Minqian Chen, Jana Wäldchen

Abstract read
In one paragraph

Article in Plant methods, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it.

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  8. A Performance Comparison of Classification Algorithms for Rose Plants.Computational intelligence and neuroscience · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Michael Rzanny1Department of Biogeochemical Integration, Max Planck Institute for Biogeochemistry, Hans-Knöll-Str. 10, Jena, Germany.ORCID 0000-0002-7232-5547
Patrick Mäder2Software Engineering for Safety-Critical Systems Group, Technische Universität Ilmenau, Ehrenbergstr. 20, 98693 Ilmenau, Germany.
Alice Deggelmann1Department of Biogeochemical Integration, Max Planck Institute for Biogeochemistry, Hans-Knöll-Str. 10, Jena, Germany.
Minqian Chen2Software Engineering for Safety-Critical Systems Group, Technische Universität Ilmenau, Ehrenbergstr. 20, 98693 Ilmenau, Germany.
Jana Wäldchen1Department of Biogeochemical Integration, Max Planck Institute for Biogeochemistry, Hans-Knöll-Str. 10, Jena, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDeep learning algorithms for automated plant identification need large quantities of precisely labelled images in order to produce reliable classification results. Here, we explore what kind of perspectives and their combinations contain more characteristic information and therefore allow for higher identification accuracy.

resultsWe developed an image-capturing scheme to create observations of flowering plants. Each observation comprises five in-situ images of the same individual from predefined perspectives (entire plant, flower frontal- and lateral view, leaf top- and back side view). We collected a completely balanced dataset comprising 100 observations for each of 101 species with an emphasis on groups of conspecific and visually similar species including twelve Poaceae species. We used this dataset to train convolutional neural networks and determine the prediction accuracy for each single perspective and their combinations via score level fusion. Top-1 accuracies ranged between 77% (entire plant) and 97% (fusion of all perspectives) when averaged across species. Flower frontal view achieved the highest accuracy (88%). Fusing flower frontal, flower lateral and leaf top views yields the most reasonable compromise with respect to acquisition effort and accuracy (96%). The perspective achieving the highest accuracy was species dependent.

conclusionsWe argue that image databases of herbaceous plants would benefit from multi organ observations, comprising at least the front and lateral perspective of flowers and the leaf top view.

Indexed as

Computer visionConvolutional networksDeep learningFlowerMulti-organ plant classificationObject classificationPlant determinationPlant imagesPlant leafPlant observationPoaceaeSpecies identification

Identifiers

PMID31367223
PMCPMC6651978

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.