Evidence map›Paper›PMID 31366621›Full record

ArticleBlood2019

Genomic landscape of neutrophilic leukemias of ambiguous diagnosis.

Haijiao Zhang, Beth Wilmot, Daniel Bottomly, Kim-Hien T Dao, Emily Stevens, Christopher A Eide, Vishesh Khanna, Angela Rofelty, Samantha Savage, Anna Reister Schultz and 22 more

Abstract read
In one paragraph

Article in Blood, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Expanding the Spectrum ofJournal of clinical medicine · 2025
    Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. The spectrum of Ph-negative disease: CNL and CSF3R-related disorders.Hematology. American Society of Hematology. Education Program · 2024
    Review
  13. Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Atypical CML: diagnosis and treatment.Hematology. American Society of Hematology. Education Program · 2023
    Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

32 authors.

Haijiao ZhangDepartment of Cell, Developmental and Cancer Biology.ORCID 0000-0002-0749-9866
Beth WilmotDivision of Bioinformatics and Computational Biology, Department of Medical Informatics and Clinical Epidemiology, Knight Cancer Institute, Oregon Health & Science University, Portland, OR.
Daniel BottomlyDivision of Bioinformatics and Computational Biology, Department of Medical Informatics and Clinical Epidemiology, Knight Cancer Institute, Oregon Health & Science University, Portland, OR.
Kim-Hien T DaoDivision of Hematology and Medical Oncology, and.
Emily StevensFred Hutchinson Cancer Research Institute, Washington University School of Medicine, Seattle, WA.
Christopher A EideDivision of Hematology and Medical Oncology, and.
Vishesh KhannaDivision of Hematology and Medical Oncology, and.
Angela RofeltyDepartment of Cell, Developmental and Cancer Biology.
Samantha SavageDepartment of Cell, Developmental and Cancer Biology.ORCID 0000-0003-3961-2197
Anna Reister SchultzDepartment of Cell, Developmental and Cancer Biology.ORCID 0000-0001-9977-7343
Nicola LongDepartment of Cell, Developmental and Cancer Biology.ORCID 0000-0002-9010-8167
Libbey WhiteDivision of Bioinformatics and Computational Biology, Department of Medical Informatics and Clinical Epidemiology, Knight Cancer Institute, Oregon Health & Science University, Portland, OR.ORCID 0000-0003-4409-083X
Amy CarlosIntegrated Genomics Laboratories, Oregon Health & Science University, Portland, OR.
Rachel HensonIntegrated Genomics Laboratories, Oregon Health & Science University, Portland, OR.
Chenwei LinIntegrated Genomics Laboratories, Oregon Health & Science University, Portland, OR.
Robert SearlesIntegrated Genomics Laboratories, Oregon Health & Science University, Portland, OR.
Robert H CollinsHematology/Oncology, Department of Internal Medicine, University of Texas Southwestern Medical Center, Dallas, TX.
Daniel J DeAngeloDepartment of Medical Oncology, Dana-Farber Cancer Institute, Harvard Medical School, Boston, MA.
Michael W DeiningerHuntsman Cancer Institute, University of Utah, Salt Lake City, UT.
Tamara DunnStanford Cancer Institute, Stanford University School of Medicine, Stanford, CA.
Than HeinHuntsman Cancer Institute, University of Utah, Salt Lake City, UT.
Marlise R LuskinDepartment of Medical Oncology, Dana-Farber Cancer Institute, Harvard Medical School, Boston, MA.
Bruno C MedeirosStanford Cancer Institute, Stanford University School of Medicine, Stanford, CA.
Stephen T OhHematology Division, Department of Medicine, Washington University School of Medicine, Washington University in St. Louis, St. Louis, MO; and.ORCID 0000-0002-8564-5400
Daniel A PollyeaDivision of Hematology, Oncology, and Bone Marrow Transplantation, University of Colorado School of Medicine, Aurora, CO.ORCID 0000-0001-6519-4860
David P SteensmaDepartment of Medical Oncology, Dana-Farber Cancer Institute, Harvard Medical School, Boston, MA.
Richard M StoneDepartment of Medical Oncology, Dana-Farber Cancer Institute, Harvard Medical School, Boston, MA.
Brian J DrukerDivision of Hematology and Medical Oncology, and.ORCID 0000-0001-8331-8206
Shannon K McWeeneyDivision of Bioinformatics and Computational Biology, Department of Medical Informatics and Clinical Epidemiology, Knight Cancer Institute, Oregon Health & Science University, Portland, OR.
Julia E MaxsonDivision of Hematology and Medical Oncology, and.
Jason R GotlibStanford Cancer Institute, Stanford University School of Medicine, Stanford, CA.
Jeffrey W TynerDepartment of Cell, Developmental and Cancer Biology.ORCID 0000-0002-2133-0960

Funding

Understanding the origins of rapid recurrence of pancreatic cancer after resectionP30CA069533 · NCI · OREGON HEALTH & SCIENCE UNIVERSITY · PI Grace B Gill · 1997 to 2026
$60.5M
TYROSINE KINASE ONCOGENESIS IN MYELOID LEUKEMIAP01CA066996 · NCI · DANA-FARBER CANCER INSTITUTE · PI SCOTT A ARMSTRONG · 1996 to 2026
$52.5M
Tumor Intrinsic and Microenvironmental Mechanisms Driving Drug Combination Efficacy and Resistance in AMLU54CA224019 · NCI · OREGON HEALTH & SCIENCE UNIVERSITY · PI BRIAN J DRUKER, Shannon K. McWeeney · 2017 to 2026
$13.9M
Functional Genomic Discovery of Pathway Targeted and Immune Modulatory Therapeutic Combinations in Hematologic MalignanciesU01CA217862 · NCI · OREGON HEALTH & SCIENCE UNIVERSITY · PI DRUKER, BRIAN J, TYNER, JEFFREY WALLACE · 2017 to 2021
$5.3M
Pathogenetic Mechanism and Clinical Targeting of CSF3R-Driven CancerR01CA183974 · NCI · OREGON HEALTH & SCIENCE UNIVERSITY · PI TYNER, JEFFREY WALLACE · 2014 to 2018
$1.6M
Pathogenic Mechanisms of CSF3R Mutations in LeukemiaR00CA190605 · NCI · OREGON HEALTH & SCIENCE UNIVERSITY · PI MAXSON, JULIA E · 2016 to 2018
$733k
ROR1 as a Therapeutic Target in Acute Lymphoblastic LeukemiaR00CA151457 · NCI · OREGON HEALTH & SCIENCE UNIVERSITY · PI TYNER, JEFFREY WALLACE · 2012 to 2014
$723k
Characterizing the pathogenesis and targeted therapeutics of Wilms' Tumor 1 (WT1) mutations in AMLK99CA237630 · NCI · OREGON HEALTH & SCIENCE UNIVERSITY · PI ZHANG, HAIJIAO · 2019 to 2020
$204k
Pathogenic Mechanisms of CSF3R Mutations in LeukemiaK99CA190605 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI MAXSON, JULIA E · 2014 to 2015
$161k
NCI NIH HHS K99 CA190605NCI NIH HHS K99 CA237630NCI NIH HHS P01 CA066996NCI NIH HHS P30 CA069533NCI NIH HHS R00 CA151457NCI NIH HHS R00 CA190605NCI NIH HHS R01 CA183974NCI NIH HHS U01 CA217862NCI NIH HHS U54 CA224019
6 · The paper itself

Abstract

Chronic neutrophilic leukemia (CNL), atypical chronic myeloid leukemia (aCML), and myelodysplastic/myeloproliferative neoplasms, unclassifiable (MDS/MPN-U) are a group of rare and heterogeneous myeloid disorders. There is strong morphologic resemblance among these distinct diagnostic entities as well as a lack of specific molecular markers and limited understanding of disease pathogenesis, which has made diagnosis challenging in certain cases. The treatment has remained empirical, resulting in dismal outcomes. We, therefore, performed whole-exome and RNA sequencing of these rare hematologic malignancies and present the most complete survey of the genomic landscape of these diseases to date. We observed a diversity of combinatorial mutational patterns that generally do not cluster within any one diagnosis. Gene expression analysis reveals enrichment, but not cosegregation, of clinical and genetic disease features with transcriptional clusters. In conclusion, these groups of diseases represent a continuum of related diseases rather than discrete diagnostic entities.

Indexed as

AdultAgedAged, 80 and overCells, CulturedCohort StudiesDiagnosis, DifferentialDNA Mutational AnalysisFemaleGene Expression ProfilingGenomicsHEK293 CellsHematologic NeoplasmsHumansLeukemia, Neutrophilic, ChronicMaleMiddle Aged

Identifiers

PMID31366621
PMCPMC6742922

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.