Evidence map›Paper›PMID 31365523›Full record

ArticlePLoS genetics2019

Defects of mitochondrial RNA turnover lead to the accumulation of double-stranded RNA in vivo.

Aleksandra Pajak, Isabelle Laine, Paula Clemente, Najla El-Fissi, Florian A Schober, Camilla Maffezzini, Javier Calvo-Garrido, Rolf Wibom, Roberta Filograna, Ashish Dhir and 3 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
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  12. Review
  13. Article
  14. Mitochondrial nucleic acids in innate immunity and beyond.Experimental & molecular medicine · 2023
    Review
  15. Article
  16. A new metabolic model ofLife science alliance · 2023
    Article
  17. Article
  18. SUV3 Helicase and Mitochondrial Homeostasis.International journal of molecular sciences · 2023
    Review
  19. Article
  20. TheProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 2 countries.

Aleksandra PajakDepartment of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden.ORCID 0000-0001-8294-9620
Isabelle LaineDepartment of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden.
Paula ClementeDepartment of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden.ORCID 0000-0002-6885-3750
Najla El-FissiDepartment of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden.
Florian A SchoberMax Planck Institute Biology of Ageing - Karolinska Institutet Laboratory, Karolinska Institutet, Stockholm, Sweden.ORCID 0000-0003-4604-6170
Camilla MaffezziniDepartment of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden.ORCID 0000-0002-0397-1609
Javier Calvo-GarridoMax Planck Institute Biology of Ageing - Karolinska Institutet Laboratory, Karolinska Institutet, Stockholm, Sweden.
Rolf WibomDepartment of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden.ORCID 0000-0001-6721-4642
Roberta FilogranaDepartment of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden.
Ashish DhirCentre for Genomic and Experimental Medicine, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom.
Anna WedellMax Planck Institute Biology of Ageing - Karolinska Institutet Laboratory, Karolinska Institutet, Stockholm, Sweden.
Christoph FreyerDepartment of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden.ORCID 0000-0003-0418-1673
Anna WredenbergDepartment of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden.ORCID 0000-0002-2500-6121
Karolinska Institutet · SEKarolinska University Hospital · SEInstitute of Genetics and Cancer · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The RNA helicase SUV3 and the polynucleotide phosphorylase PNPase are involved in the degradation of mitochondrial mRNAs but their roles in vivo are not fully understood. Additionally, upstream processes, such as transcript maturation, have been linked to some of these factors, suggesting either dual roles or tightly interconnected mechanisms of mitochondrial RNA metabolism. To get a better understanding of the turn-over of mitochondrial RNAs in vivo, we manipulated the mitochondrial mRNA degrading complex in Drosophila melanogaster models and studied the molecular consequences. Additionally, we investigated if and how these factors interact with the mitochondrial poly(A) polymerase, MTPAP, as well as with the mitochondrial mRNA stabilising factor, LRPPRC. Our results demonstrate a tight interdependency of mitochondrial mRNA stability, polyadenylation and the removal of antisense RNA. Furthermore, disruption of degradation, as well as polyadenylation, leads to the accumulation of double-stranded RNAs, and their escape out into the cytoplasm is associated with an altered immune-response in flies. Together our results suggest a highly organised and inter-dependable regulation of mitochondrial RNA metabolism with far reaching consequences on cellular physiology.

Indexed as

AnimalsDEAD-box RNA HelicasesDNA-Directed RNA PolymerasesDrosophila melanogasterDrosophila ProteinsFemaleMaleNeoplasm ProteinsPolyadenylationPolyribonucleotide NucleotidyltransferaseRNA, AntisenseRNA, Double-StrandedRNA, MitochondrialRNA StabilityDEAD-box RNA HelicasesDNA-Directed RNA PolymerasesDrosophila ProteinsNeoplasm ProteinsPolyribonucleotide NucleotidyltransferaseRNA, AntisenseRNA, Double-StrandedRNA, MitochondrialSUV3 protein, Drosophila

Identifiers

PMID31365523
PMCPMC6668790
OpenAlexW2966653701

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.