Evidence map›Paper›PMID 31364706›Full record

ArticleGenome biology and evolution2019

Draft Genome of Busseola fusca, the Maize Stalk Borer, a Major Crop Pest in Sub-Saharan Africa.

Kayla M Hardwick, Awino Maureiq Edith Ojwang', Francesca Stomeo, Solomon Maina, Gladys Bichang'a, Paul-André Calatayud, Jonathan Filée, Appolinaire Djikeng, Caitlin Miller, Leah Cepko and 3 more

Open access · goldAbstract read
In one paragraph

Article in Genome biology and evolution, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 8 institutions in 6 countries.

Kayla M HardwickDepartment of Biology, Reed College, Portland, Oregon.
Awino Maureiq Edith Ojwang'Biosciences eastern and central Africa - International Livestock Research Institute (BecA-ILRI) Hub, Nairobi, Kenya.
Francesca StomeoBiosciences eastern and central Africa - International Livestock Research Institute (BecA-ILRI) Hub, Nairobi, Kenya.
Solomon MainaBiosciences eastern and central Africa - International Livestock Research Institute (BecA-ILRI) Hub, Nairobi, Kenya.
Gladys Bichang'aDepartment of Biochemistry, University of Nairobi, Kenya.
Paul-André CalatayudInternational Centre of Insect Physiology and Ecology (icipe), Nairobi, Kenya.
Jonathan FiléeEvolution, Génomes, Comportement, Ecologie, CNRS, IRD, Université Paris-Sud, Université Paris-Saclay, Gif-sur-Yvette, France.
Appolinaire DjikengBiosciences eastern and central Africa - International Livestock Research Institute (BecA-ILRI) Hub, Nairobi, Kenya.
Caitlin MillerDepartment of Biology, Reed College, Portland, Oregon.
Leah CepkoDepartment of Biology, Reed College, Portland, Oregon.
Alistair C DarbyCentre for Genomic Research, Institute of Integrative Biology, University of Liverpool, Liverpool, United Kingdom.
Bruno Le RuInternational Centre of Insect Physiology and Ecology (icipe), Nairobi, Kenya.
Sarah SchaackDepartment of Biology, Reed College, Portland, Oregon.
International Livestock Research Institute · KEReed College · USÉvolution, Génomes, Comportement, Écologie · FRCornell University · USNorth Carolina State University · USUniversité Paris-Saclay · FRUniversity of Liverpool · GBUniversity of Nairobi · KE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The maize stalk borer, Busseola fusca, is an important Lepidopteran pest of cereal crops in Central, East, and Southern Africa. Crop losses due to B. fusca feeding activity vary by region, but can result in total crop loss in areas with high levels of infestation. Genomic resources provide critical insight into the biology of pest species and can allow for the development of effective management tools and strategies to mitigate their impact on agriculture. To this end, we sequenced, assembled, and annotated the genome of B. fusca. The total assembled genome size was 492.9 Mb with 19,417 annotated protein-coding genes. Using a comparative approach, we identified a putative expansion in the Chorion gene family, which is involved in the formation of the egg shell structure. Our analysis revealed high repeat content within the B. fusca genome, with LTR sequences comprising the majority of the repetitive sequence. We hope genomic resources will provide a foundation for future work aimed at developing an integrated pest management strategy to reduce B. fusca's impact on food security.

Indexed as

Genome, InsectAnimalsCrops, AgriculturalGene Expression RegulationGenomicsHerbivoryInsect ProteinsMothsTranscriptomeZea maysInsect Proteinsagricultural pestinsect genomicsLepidoptera

Identifiers

PMID31364706
PMCPMC6697066
OpenAlexW2969810253

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.