Evidence map›Paper›PMID 31364355›Full record

ReviewInorganic chemistry2019

Metal-Dependent DNAzymes for the Quantitative Detection of Metal Ions in Living Cells: Recent Progress, Current Challenges, and Latest Results on FRET Ratiometric Sensors.

Kevin Hwang, Quanbing Mou, Ryan J Lake, Mengyi Xiong, Brandalynn Holland, Yi Lu

Open access · greenAbstract readReview
In one paragraph

Review in Inorganic chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
4.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 74 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Ratiometric Detection of ZnChemistry (Basel, Switzerland) · 2023
    Article
  5. Article
  6. Article
  7. [Research progress on the fluorescence resonance energy transfer-based polymer micelles as drug carriers].Sheng wu yi xue gong cheng xue za zhi = Journal of biomedical engineering = Shengwu yixue gongchengxue zazhi · 2022
    Review
  8. Review
  9. Article
  10. Article
  11. Biosensing with DNAzymes.Chemical Society reviews · 2021
    Review
  12. Article
  13. Article
  14. Article
  15. Functional Nucleic Acid Nanomaterials: Development, Properties, and Applications.Angewandte Chemie (International ed. in English) · 2021
    Review
  16. Review
  17. Tools and techniques for illuminating the cell biology of zinc.Biochimica et biophysica acta. Molecular cell research · 2021
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 2 countries.

Kevin HwangDepartment of Chemistry , University of Illinois at Urbana-Champaign , Urbana , Illinois 61801 , United States.
Quanbing MouDepartment of Chemistry , University of Illinois at Urbana-Champaign , Urbana , Illinois 61801 , United States.
Ryan J LakeDepartment of Chemistry , University of Illinois at Urbana-Champaign , Urbana , Illinois 61801 , United States.
Mengyi XiongDepartment of Chemistry , University of Illinois at Urbana-Champaign , Urbana , Illinois 61801 , United States.
Brandalynn HollandDepartment of Chemistry , University of Illinois at Urbana-Champaign , Urbana , Illinois 61801 , United States.
Yi LuDepartment of Chemistry , University of Illinois at Urbana-Champaign , Urbana , Illinois 61801 , United States.ORCID http://orcid.org/0000-0003-1221-6709
University of Illinois Urbana-Champaign · US

Funding

Selection and Sensing Applications of DNAzymes Selective for Paramagnetic Metal IonsR01GM124316 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI LU, YI · 2017 to 2020
$1.4M
Novel DNAzyme sensors for lithium and sodium to understand cellular and molecular mechanisms of lithium treatment of bipolar disorderR21MH110975 · NIMH · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI LU, YI · 2016 to 2017
$401k
NIGMS NIH HHS R01 GM124316NIMH NIH HHS R21 MH110975
6 · The paper itself

Abstract

Many different metal ions are involved in various biological functions including metallomics and trafficking, and yet there are currently effective sensors for only a few metal ions, despite the first report of metal sensors for calcium more than 40 years ago. To expand upon the number of metal ions that can be probed in biological systems, we and other laboratories employ the in vitro selection method to obtain metal-specific DNAzymes with high specificity for a metal ion and then convert these DNAzymes into fluorescent sensors for these metal ions using a catalytic beacon approach. In this Forum Article, we summarize recent progress made in developing these DNAzyme sensors to probe metal ions in living cells and in vivo, including several challenges that we were able to overcome for this application, such as DNAzyme delivery, spatiotemporal control, and signal amplification. Furthermore, we have identified a key remaining challenge for the quantitative detection of metal ions in living cells and present a new design and the results of a Förster resonance energy transfer (FRET)-based DNAzyme sensor for the ratiometric quantification of Zn

Indexed as

Fluorescence Resonance Energy TransferDNA, CatalyticFluorescent DyesHeLa CellsHumansIonsMetalsDNA, CatalyticFluorescent DyesIonsMetals

Identifiers

PMID31364355
PMCPMC7176321
OpenAlexW2965009032

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.