Evidence map›Paper›PMID 31363184›Full record

ArticleEuropean journal of human genetics : EJHG2019

Heritability of human visual contour integration-an integrated genomic study.

Zijian Zhu, Biqing Chen, Ren Na, Wan Fang, Wenxia Zhang, Qin Zhou, Shanbi Zhou, Han Lei, Ailong Huang, Tingmei Chen and 5 more

Abstract read
In one paragraph

Article in European journal of human genetics : EJHG, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Zijian ZhuPKU-IDG/McGovern Institute for Brain Research, and Peking-Tsinghua Center for Life Sciences, Peking University, 100871, Beijing, China.ORCID http://orcid.org/0000-0003-4307-810X
Biqing ChenPKU-IDG/McGovern Institute for Brain Research, and Peking-Tsinghua Center for Life Sciences, Peking University, 100871, Beijing, China.ORCID http://orcid.org/0000-0003-1443-1023
Ren NaPKU-IDG/McGovern Institute for Brain Research, and Peking-Tsinghua Center for Life Sciences, Peking University, 100871, Beijing, China.
Wan FangPKU-IDG/McGovern Institute for Brain Research, and Peking-Tsinghua Center for Life Sciences, Peking University, 100871, Beijing, China.
Wenxia ZhangPKU-IDG/McGovern Institute for Brain Research, and Peking-Tsinghua Center for Life Sciences, Peking University, 100871, Beijing, China.
Qin ZhouCollege of Laboratory Medicine, Chongqing Medical University, 400016, Chongqing, China.
Shanbi ZhouUniversity-Town Hospital of Chongqing Medical University, 401331, Chongqing, China.
Han LeiCollege of Laboratory Medicine, Chongqing Medical University, 400016, Chongqing, China.
Ailong HuangCollege of Laboratory Medicine, Chongqing Medical University, 400016, Chongqing, China.
Tingmei ChenCollege of Laboratory Medicine, Chongqing Medical University, 400016, Chongqing, China.
Dongsheng NiDivision of Molecular Nephrology and Creative Training Center for Undergraduates, M.O.E. Key Laboratory of Medical Diagnostics, College of Laboratory Medicine, Chongqing Medical University, 400016, Chongqing, China.
Yuping GuDivision of Molecular Nephrology and Creative Training Center for Undergraduates, M.O.E. Key Laboratory of Medical Diagnostics, College of Laboratory Medicine, Chongqing Medical University, 400016, Chongqing, China.
Jianing LiuDivision of Molecular Nephrology and Creative Training Center for Undergraduates, M.O.E. Key Laboratory of Medical Diagnostics, College of Laboratory Medicine, Chongqing Medical University, 400016, Chongqing, China.
Yi RaoPKU-IDG/McGovern Institute for Brain Research, and Peking-Tsinghua Center for Life Sciences, Peking University, 100871, Beijing, China. yrao@pku.edu.cn.
Fang FangPKU-IDG/McGovern Institute for Brain Research, and Peking-Tsinghua Center for Life Sciences, Peking University, 100871, Beijing, China. ffang@pku.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Contour integration, a key visual function to deal with occlusion and discontinuity in natural scenes, is essential to human survival. However, individuals are not equally well equipped with this ability. In particular, contour integration deficiencies are commonly detected in patients with mental disorders, especially schizophrenia. To understand the underlying sources of these individual differences, the current study investigated the genetic basis of contour integration in humans. A total of 2619 normal participants were tested on their ability to detect continuous contours embedded in a cluttered background. Quantitative genomic analysis was performed, involving heritability estimation based on single nucleotide polymorphisms (SNPs) and association testing at SNP, gene, and pathway levels. Heritability estimation showed that common SNPs contributed 49.5% (standard error of the mean = 15.6%) of overall phenotypic variation, indicating moderate heritability of contour integration. Two-stage genome-wide association analysis (GWAS) detected four SNPs reaching genome-wide significance in the discovery test (N = 1931) but not passing the replication test (N = 688). Gene-level analysis further revealed a significant genome-wide association of a microRNA-encoding gene MIR1178 in both the discovery and replication cohorts. Another gene poly(A)-binding protein nuclear 1 like, cytoplasmic (PABPN1L) showed suggestive significance in the discovery cohort (p < 1 × 10

Indexed as

Cohort StudiesFemaleForm PerceptionGenome-Wide Association StudyGenomicsGenotypeHumansMaleMicroRNAsPoly(A)-Binding ProteinsPolymorphism, Single NucleotideSchizophreniaVision, OcularMicroRNAsPABPN1L protein, humanPoly(A)-Binding Proteins

Identifiers

PMID31363184
PMCPMC6871533

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.