Evidence map›Paper›PMID 31361051›Full record

ArticleMolecular microbiology2019

Identification, characterization and benefits of an exclusion system in an integrative and conjugative element of Bacillus subtilis.

Monika Avello, Kathleen P Davis, Alan D Grossman

Abstract read
In one paragraph

Article in Molecular microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. The extended mobility of plasmids.Nucleic acids research · 2025
    Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Contribution of the Mobilome to the Configuration of the Resistome ofInternational journal of molecular sciences · 2024
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Cell Factory Engineering of UndomesticatedFrontiers in microbiology · 2022
    Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Monika AvelloDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA.
Kathleen P DavisDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA.
Alan D GrossmanDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA.

Funding

PRE-DOCTORAL TRAINING IN THE BIOLOGICAL SCIENCEST32GM007287 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI BELL, STEPHEN P., KEATING, AMY E · 1985 to 2019
$40.8M
QUORUM SENSING AND GENE EXPRESSION IN BACILLUS SUBTILISR01GM050895 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI GROSSMAN, ALAN D · 1994 to 2017
$5.6M
Mechanisms and regulation of replication, the cell cycle, gene expression, and horizontal gene transfer in prokaryotes, focusing on Bacillus subtilisR35GM122538 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI GROSSMAN, ALAN D · 2017 to 2021
$3.2M
NIGMS NIH HHS R01 GM050895NIGMS NIH HHS R35 GM122538NIGMS NIH HHS T32 GM007287
6 · The paper itself

Abstract

Integrative and conjugative elements (ICEs) are mobile genetic elements that transfer from cell to cell by conjugation (like plasmids) and integrate into the chromosomes of bacterial hosts (like lysogenic phages or transposons). ICEs are prevalent in bacterial chromosomes and play a major role in bacterial evolution by promoting horizontal gene transfer. Exclusion prevents the redundant transfer of conjugative elements into host cells that already contain a copy of the element. Exclusion has been characterized mostly for conjugative elements of Gram-negative bacteria. Here, we report the identification and characterization of an exclusion mechanism in ICEBs1 from the Gram-positive bacterium Bacillus subtilis. We found that cells containing ICEBs1 inhibit the activity of the ICEBs1-encoded conjugation machinery in other cells. This inhibition (exclusion) was specific to the cognate conjugation machinery and the ICEBs1 gene yddJ was both necessary and sufficient to mediate exclusion by recipient cells. Through a mutagenesis and enrichment screen, we identified exclusion-resistant mutations in the ICEBs1 gene conG. Using genes from a heterologous but related ICE, we found that the exclusion specificity was determined by ConG and YddJ. Finally, we found that under conditions that support conjugation, exclusion provides a selective advantage to the element and its host cells.

Indexed as

Bacillus subtilisBacterial ProteinsChromosomes, BacterialConjugation, GeneticDNA, BacterialDNA ReplicationGene Transfer, HorizontalIntegration Host FactorsPlasmidsBacterial ProteinsDNA, BacterialIntegration Host Factors

Identifiers

PMID31361051
PMCPMC6827876

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.