Evidence map›Paper›PMID 31360222›Full record

ArticleBiotechnology for biofuels2019

A screening approach for assessing lytic polysaccharide monooxygenase activity in fungal strains.

Pooja Dixit, Biswajit Basu, Munish Puri, Deepak Kumar Tuli, Anshu Shankar Mathur, Colin James Barrow

Open access · goldAbstract read
In one paragraph

Article in Biotechnology for biofuels, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Pooja DixitDBT-IOC Centre for Bioenergy Research, R&D Centre, Indian Oil Corporation Limited, Faridabad, India.
Biswajit BasuDBT-IOC Centre for Bioenergy Research, R&D Centre, Indian Oil Corporation Limited, Faridabad, India.
Munish Puri2School of Life and Environmental Sciences, Deakin University, Geelong, VIC Australia.
Deepak Kumar TuliDBT-IOC Centre for Bioenergy Research, R&D Centre, Indian Oil Corporation Limited, Faridabad, India.
Anshu Shankar MathurDBT-IOC Centre for Bioenergy Research, R&D Centre, Indian Oil Corporation Limited, Faridabad, India.
Colin James Barrow2School of Life and Environmental Sciences, Deakin University, Geelong, VIC Australia.ORCID 0000-0002-2153-7267
Deakin University · AUIndian Oil Corporation (India) · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundEfforts to develop efficient lignocellulose-degrading enzymatic preparations have led to the relatively recent discovery of a new class of novel cellulase boosters, termed lytic polysaccharide monoxygenases (LPMOs). These enzymes are copper-dependent metalloenzymes that initiate the biomass deconstruction process and subsequently work together with cellulases, hemicellulases, and other accessory enzymes to enhance their hydrolytic action. Given their wide distribution and diversity, screening and isolation of potent LPMOs from natural fungal diversity may provide an important avenue for increasing the efficiency of cellulases and thereby decreasing cellulosic ethanol production costs. However, methods for quick screening and detection are still not widely available. In this article, a simple and sensitive method is described by combining nonhydrolytic activity enhancement followed by LC-MS-based quantitation of LPMOs.

resultsIn this study, a screening approach has been developed for the detection of nonhydrolytic cellulase-enhancing enzymes in crude fungal supernatants. With the application of a saturating benchmark cocktail of Celluclast 1.5L, fungal isolates were selected which had the capability of hydrolyzing pretreated rice straw by their synergistic enzyme fractions. Subsequently, these fungal extracts along with an LPMO-enriched commercial enzyme were investigated for their ability to produce Type I LPMO activity. An LC-MS-based methodology was applied to quantitate gluconic acid in enzymatic hydrolysates as an indirect measurement of Type I LPMO activity.

conclusionThe present study describes an LC-MS-based separation method to detect and quantitate LPMO activity in a commercial enzyme. This method was also applied to screen fungal extracts. The developed screening strategy has enabled detection of LPMO activity in two industrially important

Indexed as

AA9 LPMOsAcid-treated rice strawBiorefineryCellobionic acidCelluloseGluconic acidHemicellulosePenicillium sp. LPMOsSynergy in cellulasesUPLC–ESI–MS

Identifiers

PMID31360222
PMCPMC6643308
OpenAlexW2963863571

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.