Evidence map›Paper›PMID 31360106›Full record

ArticleInternational journal of biological sciences2019

A Synthetic Light-switchable System based on CRISPR Cas13a Regulates the Expression of LncRNA MALAT1 and Affects the Malignant Phenotype of Bladder Cancer Cells.

Fuming Qi, Bo Tan, Fujun Ma, Bo Zhu, Li Zhang, Xiaoyun Liu, Honglei Li, Jinhui Yang, Bo Cheng

Abstract read
In one paragraph

Article in International journal of biological sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Review
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  3. Review
  4. Review
  5. Article
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  7. Review
  8. Advances in application of CRISPR-Cas13a system.Frontiers in cellular and infection microbiology · 2024
    Review
  9. Article
  10. Review
  11. Optimization of CRISPR-Cas system for clinical cancer therapy.Bioengineering & translational medicine · 2023
    Review
  12. Targeting Cancer with CRISPR/Cas9-Based Therapy.International journal of molecular sciences · 2022
    Review
  13. Review
  14. Review
  15. Functional Features and Current Applications of the RNA-Targeting Type VI CRISPR-Cas Systems.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2021
    Review
  16. Article
  17. Review
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Fuming QiUrology and Andrology Department, Shengli OilFiled Central Hospital, Dongying, 257034, Shandong, China.
Bo TanUrology and Andrology Department, Shengli OilFiled Central Hospital, Dongying, 257034, Shandong, China.
Fujun MaUrology and Andrology Department, Shengli OilFiled Central Hospital, Dongying, 257034, Shandong, China.
Bo ZhuUrology and Andrology Department, Shengli OilFiled Central Hospital, Dongying, 257034, Shandong, China.
Li ZhangBurn and Plastic surgery Department, Shengli OilFiled Central Hospital, Dongying, 257034, Shandong, China.
Xiaoyun LiuUrology and Andrology Department, Shengli OilFiled Central Hospital, Dongying, 257034, Shandong, China.
Honglei LiMedical Department, Shengli OilFiled Central Hospital, Dongying, 257034, Shandong, China.
Jinhui YangUrology and Andrology Department, Shengli OilFiled Central Hospital, Dongying, 257034, Shandong, China.
Bo ChengUrology and Andrology Department, Shengli OilFiled Central Hospital, Dongying, 257034, Shandong, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA sequences drive their various functions through post-transcriptional processes, using mRNA or lncRNA (long non-coding RNA), and this accommodates the gene network by using various RNA types. However, the tools necessary to regulate RNA molecules are few. Likewise, RNA knockdown techniques that can be artificially controlled have not been extensively explored. Here, we investigated a novel light-inducible synthetic system based on CRISPR-Cas13a that can be used for RNA knockdown and binding in cancer cells. Based on the techniques of synthetic molecular biology, we constructed a light sensor, which efficiently induced Cas13a protein expression after blue light illumination. We also chose a lncRNA, Metastasis-associated Lung Adenocarcinoma Transcript 1 (MALAT1), as the functional target and detected it in bladder cancer 5637 and T24 cells in order to demonstrate the application of our synthetic system. Fluorescence reporter assays and real-time quantitative PCR (qRT-PCR) were used to detect the expression of the target gene. Phenotypic experiments were also used to test the effects of our synthetic system in bladder cancers. The results showed that our synthetic light-switchable system could inhibit the expression of MALAT1, and the fluorescence activity of enhanced green fluorescent protein. Our novel system provides a new technique to study RNA functions in gene networks and for precise tumor treatments.

Indexed as

ApoptosisCell MovementCell ProliferationClustered Regularly Interspaced Short Palindromic RepeatsFlow CytometryGene Expression Regulation, NeoplasticHumansMicroRNAsReal-Time Polymerase Chain ReactionRNA, Long NoncodingUrinary Bladder NeoplasmsMALAT1 long non-coding RNA, humanMicroRNAsRNA, Long Noncodingcancer cellCas13alight inducibleRNAsynthetic

Identifiers

PMID31360106
PMCPMC6643210

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.