Evidence map›Paper›PMID 31359994›Full record

ArticleBioinformation2019

Identification of potential drug targets and vaccine candidates in Clostridium botulinum using subtractive genomics approach.

Rati Sudha, Amit Katiyar, Poonam Katiyar, Harpreet Singh, Purushottam Prasad

Abstract read
In one paragraph

Article in Bioinformation, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Prediction of Potential Drug Targets and Vaccine Candidates Against Antibiotic-ResistantInternational journal of peptide research and therapeutics · 2022
    Article
  7. Article
  8. Article
  9. Article
  10. A systematic strategy for the investigation of vaccines and drugs targeting bacteria.Computational and structural biotechnology journal · 2020
    Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Rati SudhaP.G.Department of Zoology,ANS College,Magadh University,Patna (Barh)-803213,India.
Amit KatiyarICMR-AIIMS Computational GenomicsCentre,Division of I.S.R.M.,Indian Council of Medical Research,Ansari Nagar,New Delhi-110029,India.
Poonam KatiyarNCC-Pharmacovigilance Program of India (PvPI),Indian Pharmacopoeia Commission (IPC),Raj Nagar,Ghaziabad-201002,India.
Harpreet SinghICMR-AIIMS Computational GenomicsCentre,Division of I.S.R.M.,Indian Council of Medical Research,Ansari Nagar,New Delhi-110029,India.
Purushottam PrasadP.G.Department of Zoology,ANS College,Magadh University,Patna (Barh)-803213,India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A subtractive genomic approach has been utilized for the identification of potential drug targets and vaccine candidates in Clostridium botulinum, the causative agent of flaccid paralysis in humans. The emergence of drug-resistant pathogenic strains has become a significant global public health threat. Treatment with antitoxin can target the neurotoxin at the extracellular level, however, can't converse the paralysis caused by botulism. Therefore, identification of drug targets and vaccine candidates in C. botulinum would be crucial to overcome drug resistance to existing antibiotic therapy. A total of 1729 crucial proteins, including chokepoint, virulence, plasmid and resistance proteins were mined and used for subtractive channel of analysis. This analysis disclosed 15 potential targets, which were non-similar to human, gut micro flora, and anti-targets in the host. The cellular localization of 6 targets was observed in the cytoplasm and might be used as a drug target, whereas 9 targets were localized in extracellular and membrane bound proteins and can be used as vaccine candidates. Furthermore, 4 targets were observed to be homologous to more than 75 pathogens and hence are considered as broad-spectrum antibiotic targets. The identified drug and vaccine targets in this study would be useful in the design and discovery of novel therapeutic compounds against botulism.

Indexed as

Botulismdrug targetsubtractive genomicsvaccine target

Identifiers

PMID31359994
PMCPMC6651033

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.