Evidence map›Paper›PMID 31359382›Full record

ArticleMolecular biology reports2019

Three glycoside hydrolase family 12 enzymes display diversity in substrate specificities and synergistic action between each other.

Zhu Zhu, Jingyao Qu, Lele Yu, Xukai Jiang, Guodong Liu, Lushan Wang, Yinbo Qu, Yuqi Qin

Abstract read
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Article in Molecular biology reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Zhu ZhuNational Glycoengineering Research Center, Shandong University, No. 72 Binhai Road, Qingdao, 266237, China.
Jingyao QuNational Glycoengineering Research Center, Shandong University, No. 72 Binhai Road, Qingdao, 266237, China.
Lele YuNational Glycoengineering Research Center, Shandong University, No. 72 Binhai Road, Qingdao, 266237, China.
Xukai JiangNational Glycoengineering Research Center, Shandong University, No. 72 Binhai Road, Qingdao, 266237, China.
Guodong LiuNational Glycoengineering Research Center, Shandong University, No. 72 Binhai Road, Qingdao, 266237, China.
Lushan WangNational Glycoengineering Research Center, Shandong University, No. 72 Binhai Road, Qingdao, 266237, China.
Yinbo QuNational Glycoengineering Research Center, Shandong University, No. 72 Binhai Road, Qingdao, 266237, China.
Yuqi QinNational Glycoengineering Research Center, Shandong University, No. 72 Binhai Road, Qingdao, 266237, China. qinyuqi@sdu.edu.cn.
Qingdao Binhai University · CNShandong University · CNDiscovery Institute · USState Key Laboratory of Microbial Technology

Funding

National Natural Science Foundation of China 31370086National Natural Science Foundation of China 31700053Natural Science Foundation of Shandong Province ZR2019MC007
6 · The paper itself

Abstract

PoCel12A, PoCel12B, and PoCel12C are genes that encode glycoside hydrolase family 12 (GH12) enzymes in Penicillium oxalicum. PoCel12A and PoCel12B are typical GH12 enzymes that belong to fungal subfamilies 12-1 and 12-2, respectively. PoCel12C contains a low-complexity region (LCR) domain, which is not found in PoCel12A or PoCel12B and independent of fungal subfamily 12-1 or 12-2. Recombinant enzymes (named rCel12A, rCel12B and rCel12C) demonstrate existing diversity in the substrate specificities. Although most members in GH family 12 are typical endoglucanases and preferentially hydrolyze β-1,4-glucan (e.g., carboxymethylcellulose), recombinant PoCel12A is a non-typical endo-(1-4)-β-glucanase; it preferentially hydrolyzes mix-linked β-glucan (barley β-glucan, β-1,3-1,4-glucan) and slightly hydrolyzes β-1,4-glucan (carboxymethylcellulose). Recombinant PoCel12B possesses a significantly high activity against xyloglucan. A specific activity of rCel12B toward xyloglucan (239 µmol/min/mg) is the second-highest value known. Recombinant PoCel12C shows low activity toward β-glucan, carboxymethylcellulose, or xyloglucan. All three enzymes can degrade phosphoric acid-swollen cellulose (PASC). However, the hydrolysis products toward PASC by enzymes are different: the main hydrolysis products are cellotriose, cellotetraose, and cellobiose for rCel12A, rCel12B, and rCel12C, correspondingly. A synergistic action toward PASC among rCel12A and rCel12B is observed, thereby suggesting a potential application for preparing enzyme cocktails used in lignocellulose hydrolysis.

Indexed as

beta-GlucansCellulaseCelluloseGlucansGlycoside HydrolasesHydrogen-Ion ConcentrationHydrolysisLigninPenicilliumPhylogenySubstrate SpecificityTetrosesTriosesXylansbeta-GlucanscellotetraosecellotrioseCellulaseCelluloseGlucansGlycoside HydrolasesLigninlignocelluloseTetrosesTriosesXylansxyloglucanxyloglucan endo(1-4)-beta-D-glucanaseEndoglucanaseGlycoside hydrolase family 12Penicillium oxalicumXyloglucanase

Identifiers

PMID31359382
OpenAlexW2964436651

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.