Evidence map›Paper›PMID 31359264›Full record

ArticleRice (New York, N.Y.)2019

Amino acid substitutions in a polygalacturonase inhibiting protein (OsPGIP2) increases sheath blight resistance in rice.

Xijun Chen, Yuwen Chen, Lina Zhang, Zhen He, Benli Huang, Chen Chen, Qingxia Zhang, Shimin Zuo

Open access · goldAbstract read
In one paragraph

Article in Rice (New York, N.Y.), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
4.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 26 citations in OpenAlex.

  1. Frontiers in plant science · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Xijun ChenHorticulture and Plant Protection College, Yangzhou University, Yangzhou, 225009, China. xjchen@yzu.edu.cn.ORCID http://orcid.org/0000-0001-9797-5522
Yuwen ChenHorticulture and Plant Protection College, Yangzhou University, Yangzhou, 225009, China.
Lina ZhangHorticulture and Plant Protection College, Yangzhou University, Yangzhou, 225009, China.
Zhen HeHorticulture and Plant Protection College, Yangzhou University, Yangzhou, 225009, China.
Benli HuangHorticulture and Plant Protection College, Yangzhou University, Yangzhou, 225009, China.
Chen ChenHorticulture and Plant Protection College, Yangzhou University, Yangzhou, 225009, China.
Qingxia ZhangHorticulture and Plant Protection College, Yangzhou University, Yangzhou, 225009, China.
Shimin ZuoKey Laboratory of Crop Genetics and Physiology of Jiangsu Province/Key Laboratory of Plant Functional Genomics of the Ministry of Education, College of Agriculture, Yangzhou University, Yangzhou, 225009, China.
Yangzhou University · CN

Funding

Fund of Science and Technology Project of Jiangsu Province BE2015342Jiangsu Agricultural Scientific Self-Innovation Fund CX(16)1001National Key research and development project 2018YFD0300800National Key Technology Research and Development Program of the Ministry of Science and Technology of China 2015BAD01B01-5Natural Science Foundation of Jiangsu Province BK20141291
6 · The paper itself

Abstract

backgroundAn economic strategy to control plant disease is to improve plant defense to pathogens by deploying resistance genes. Plant polygalacturonase inhibiting proteins (PGIPs) have a vital role in plant defense against phytopathogenic fungi by inhibiting fungal polygalacturonase (PG) activity. We previously reported that rice PGIP1 (OsPGIP1) inhibits PG activity in Rhizoctonia solani, the causal agent of rice sheath blight (SB), and is involved in regulating resistance to SB.

resultHere, we report that OsPGIP2, the protein ortholog of OsPGIP1, does not possess PGIP activity; however, a few amino acid substitutions in a derivative of OsPGIP2, of which we provide support for L233F being the causative mutation, appear to impart OsPGIP2 with PG inhibition capability. Furthermore, the overexpression of mutated OsPGIP2

conclusionsIn summary, our results provide a new target gene for breeding SB resistance through genome-editing or natural allele mining.

Indexed as

Amino acid substitutionPolygalacturonase inhibiting proteinsRiceSheath blight resistance

Identifiers

PMID31359264
PMCPMC6663954
OpenAlexW2966083516

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.