Evidence map›Paper›PMID 31359223›Full record

ArticleProtoplasma2020

In-depth proteome analysis reveals multiple pathways involved in tomato SlMPK1-mediated high-temperature responses.

Haidong Ding, Yuan Wu, Guibo Yuan, Shuangrong Mo, Qi Chen, Xiaoying Xu, Xiaoxia Wu, Cailin Ge

Abstract read
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In one paragraph

Article in Protoplasma, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Haidong DingCo-Innovation Center for Modern Production Technology of Grain Crops/Jiangsu Key Laboratory of Crop Genetics and Physiology, College of Bioscience and Biotechnology, Yangzhou University, Yangzhou, 225009, China. hdding@yzu.edu.cn.ORCID http://orcid.org/0000-0003-0644-238X
Yuan WuCo-Innovation Center for Modern Production Technology of Grain Crops/Jiangsu Key Laboratory of Crop Genetics and Physiology, College of Bioscience and Biotechnology, Yangzhou University, Yangzhou, 225009, China.
Guibo YuanCo-Innovation Center for Modern Production Technology of Grain Crops/Jiangsu Key Laboratory of Crop Genetics and Physiology, College of Bioscience and Biotechnology, Yangzhou University, Yangzhou, 225009, China.
Shuangrong MoCo-Innovation Center for Modern Production Technology of Grain Crops/Jiangsu Key Laboratory of Crop Genetics and Physiology, College of Bioscience and Biotechnology, Yangzhou University, Yangzhou, 225009, China.
Qi ChenCo-Innovation Center for Modern Production Technology of Grain Crops/Jiangsu Key Laboratory of Crop Genetics and Physiology, College of Bioscience and Biotechnology, Yangzhou University, Yangzhou, 225009, China.
Xiaoying XuCo-Innovation Center for Modern Production Technology of Grain Crops/Jiangsu Key Laboratory of Crop Genetics and Physiology, College of Bioscience and Biotechnology, Yangzhou University, Yangzhou, 225009, China.
Xiaoxia WuCo-Innovation Center for Modern Production Technology of Grain Crops/Jiangsu Key Laboratory of Crop Genetics and Physiology, College of Bioscience and Biotechnology, Yangzhou University, Yangzhou, 225009, China.
Cailin GeCo-Innovation Center for Modern Production Technology of Grain Crops/Jiangsu Key Laboratory of Crop Genetics and Physiology, College of Bioscience and Biotechnology, Yangzhou University, Yangzhou, 225009, China.

Funding

National Natural Science Foundation of China 31101092Postdoctoral Research Foundation of China 2012T50520
6 · The paper itself

Abstract

High temperature (HT) is one of the major environmental factors which limits plant growth and yield. The mitogen-activated protein kinase (MAPK) plays vital roles in environmental stress responses. However, the mechanisms triggered by MAPKs in plants in response to HT are still extremely limited. In this study, the proteomic data of differences between SlMPK1 RNA-interference mutant (SlMPK1i) and wild type and of tomato (Solanum lycopersicum) plants under HT stress using isobaric tags for relative and absolute quantitation (iTRAQ) was re-analyzed in depth. In total, 168 differently expressed proteins (DEPs) were identified in response to HT stress, including 38 DEPs only found in wild type, and 84 DEPs specifically observed in SlMPK1i after HT treatment. The majority of higher expression of 84 DEPs were annotated into photosynthesis, oxidation-reduction process, protein folding, translation, proteolysis, stress response, and amino acid biosynthetic process. More importantly, SlMPK1-mediated photosynthesis was confirmed by the physiological characterization of SlMPK1i with a higher level of photosynthetic capacity under HT stress. Overall, the results reveal a set of potential candidate proteins helping to further understand the intricate regulatory network regulated by SlMPK1 in response to HT.

Indexed as

Hot TemperatureProteomicsSignal TransductionAntioxidantsGene Expression Regulation, PlantOxidative StressPhotosynthesisPhotosystem II Protein ComplexPlant ProteinsProteomeRNA, MessengerSolanum lycopersicumAntioxidantsPhotosystem II Protein ComplexPlant ProteinsProteomeRNA, MessengerHigh temperatureiTRAQ-based proteomeMAP kinase 1Tomato

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.