Evidence map›Paper›PMID 31358945›Full record

ArticleNature structural & molecular biology2019

Asymmetric histone inheritance via strand-specific incorporation and biased replication fork movement.

Matthew Wooten, Jonathan Snedeker, Zehra F Nizami, Xinxing Yang, Rajesh Ranjan, Elizabeth Urban, Jee Min Kim, Joseph Gall, Jie Xiao, Xin Chen

Abstract read
In one paragraph

Article in Nature structural & molecular biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 91 citations in OpenAlex.

  1. Article
  2. Reassessing evidence for symmetric histone inheritance inProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Review
  4. Article
  5. Review
  6. Review
  7. Article
  8. Reevaluation of whether histones are asymmetrically segregated during asymmetric divisions of stem cells inProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Cellular and molecular mechanisms of asymmetric stem cell division in tissue homeostasis.Genes to cells : devoted to molecular & cellular mechanisms · 2024
    Review
  14. Review
  15. Article
  16. Mitotic chromatin marking governs asymmetric segregation of DNA damage.bioRxiv : the preprint server for biology · 2024
    Article
  17. Satellite cell dynamics during skeletal muscle hypertrophy.Biochemical Society transactions · 2024
    Review
  18. Reduced Levels of Lagging Strand Polymerases Shape Stem Cell Chromatin.bioRxiv : the preprint server for biology · 2024
    Article
  19. Article
  20. Asymmetric division of stem cells and its cancer relevance.Cell regeneration (London, England) · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Matthew WootenDepartment of Biology, The Johns Hopkins University, Baltimore, MD, USA.ORCID http://orcid.org/0000-0001-8629-9899
Jonathan SnedekerDepartment of Biology, The Johns Hopkins University, Baltimore, MD, USA.
Zehra F NizamiCarnegie Institution for Science, Department of Embryology, Baltimore, MD, USA.
Xinxing YangDepartment of Biophysics and Biophysical Chemistry, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Rajesh RanjanDepartment of Biology, The Johns Hopkins University, Baltimore, MD, USA.
Elizabeth UrbanDepartment of Biology, The Johns Hopkins University, Baltimore, MD, USA.
Jee Min KimDepartment of Biology, The Johns Hopkins University, Baltimore, MD, USA.
Joseph GallCarnegie Institution for Science, Department of Embryology, Baltimore, MD, USA.
Jie XiaoDepartment of Biophysics and Biophysical Chemistry, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Xin ChenDepartment of Biology, The Johns Hopkins University, Baltimore, MD, USA. xchen32@jhu.edu.ORCID http://orcid.org/0000-0002-6990-0926
Johns Hopkins University · USCarnegie Institution for Science · US

Funding

CELLULAR AND MOLECULAR BIOLOGYT32GM007231 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI VAN DOREN, MARK B · 1985 to 2020
$18.4M
THE ORGANIZATION OF ANIMAL CELL NUCLEIR01GM033397 · NIGMS · CARNEGIE INSTITUTION OF WASHINGTON, D.C. · PI GALL, JOSEPH G. · 1985 to 2019
$8.4M
Study epigenetic inheritance during development, homeostasis and regenerationR35GM127075 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI Xin Chen · 2018 to 2026
$3.2M
Molecular and cellular mechanisms underlying asymmetric histone inheritanceR01GM112008 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI CHEN, XIN, XIAO, JIE · 2014 to 2017
$1.6M
Investigating the mechanisms and generality of asymmetric histone inheritance in multiple stem cell systemsF31GM115149 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI WOOTEN, MATTHEW · 2016 to 2017
$88k
NIGMS NIH HHS F31 GM115149NIGMS NIH HHS R01 GM033397NIGMS NIH HHS R01 GM112008NIGMS NIH HHS R35 GM127075NIGMS NIH HHS T32 GM007231
6 · The paper itself

Abstract

Many stem cells undergo asymmetric division to produce a self-renewing stem cell and a differentiating daughter cell. Here we show that, similarly to H3, histone H4 is inherited asymmetrically in Drosophila melanogaster male germline stem cells undergoing asymmetric division. In contrast, both H2A and H2B are inherited symmetrically. By combining super-resolution microscopy and chromatin fiber analyses with proximity ligation assays on intact nuclei, we find that old H3 is preferentially incorporated by the leading strand, whereas newly synthesized H3 is enriched on the lagging strand. Using a sequential nucleoside analog incorporation assay, we detect a high incidence of unidirectional replication fork movement in testes-derived chromatin and DNA fibers. Biased fork movement coupled with a strand preference in histone incorporation would explain how asymmetric old and new H3 and H4 are established during replication. These results suggest a role for DNA replication in patterning epigenetic information in asymmetrically dividing cells in multicellular organisms.

Indexed as

DNA ReplicationAdult Germline Stem CellsAnimalsAsymmetric Cell DivisionChromatidsDrosophila melanogasterDrosophila ProteinsEpigenesis, GeneticGene Expression RegulationHistonesMaleTestisTransgenesDrosophila ProteinsHistones

Identifiers

PMID31358945
PMCPMC6684448
OpenAlexW2966028657

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.