Evidence map›Paper›PMID 31358912›Full record

ArticleThe ISME journal2019

Atmospheric carbon monoxide oxidation is a widespread mechanism supporting microbial survival.

Paul R F Cordero, Katherine Bayly, Pok Man Leung, Cheng Huang, Zahra F Islam, Ralf B Schittenhelm, Gary M King, Chris Greening

Abstract read
In one paragraph

Article in The ISME journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 117 papers.

0numbers the graph read from it
0cells of the map it votes in
117citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

117 citing papers in PubMed.

  1. Article
  2. Article
  3. Thermodynamic Evaluation of Dual Substrate Growth.Biotechnology and bioengineering · 2026
    Article
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  10. Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Neurobiophilia.Brain sciences · 2026
    Review
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article

57 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Paul R F CorderoSchool of Biological Sciences, Monash University, Clayton, VIC, 3800, Australia.
Katherine BaylySchool of Biological Sciences, Monash University, Clayton, VIC, 3800, Australia.
Pok Man LeungSchool of Biological Sciences, Monash University, Clayton, VIC, 3800, Australia.ORCID http://orcid.org/0000-0002-5382-827X
Cheng HuangMonash Biomedical Proteomics Facility and Department of Biochemistry, Monash Biomedicine Discovery Institute, Monash University, Clayton, VIC, 3800, Australia.
Zahra F IslamSchool of Biological Sciences, Monash University, Clayton, VIC, 3800, Australia.ORCID http://orcid.org/0000-0001-6965-9549
Ralf B SchittenhelmMonash Biomedical Proteomics Facility and Department of Biochemistry, Monash Biomedicine Discovery Institute, Monash University, Clayton, VIC, 3800, Australia.
Gary M KingSchool of Biological Sciences, Louisiana State University, Baton Rouge, LA, 70803, USA.
Chris GreeningSchool of Biological Sciences, Monash University, Clayton, VIC, 3800, Australia. chris.greening@monash.edu.ORCID http://orcid.org/0000-0001-7616-0594

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Carbon monoxide (CO) is a ubiquitous atmospheric trace gas produced by natural and anthropogenic sources. Some aerobic bacteria can oxidize atmospheric CO and, collectively, they account for the net loss of ~250 teragrams of CO from the atmosphere each year. However, the physiological role, genetic basis, and ecological distribution of this process remain incompletely resolved. In this work, we addressed these knowledge gaps through culture-based and culture-independent work. We confirmed through shotgun proteomic and transcriptional analysis that the genetically tractable aerobic soil actinobacterium Mycobacterium smegmatis upregulates expression of a form I molydenum-copper carbon monoxide dehydrogenase by 50-fold when exhausted for organic carbon substrates. Whole-cell biochemical assays in wild-type and mutant backgrounds confirmed that this organism aerobically respires CO, including at sub-atmospheric concentrations, using the enzyme. Contrary to current paradigms on CO oxidation, the enzyme did not support chemolithoautotrophic growth and was dispensable for CO detoxification. However, it significantly enhanced long-term survival, suggesting that atmospheric CO serves a supplemental energy source during organic carbon starvation. Phylogenetic analysis indicated that atmospheric CO oxidation is widespread and an ancestral trait of CO dehydrogenases. Homologous enzymes are encoded by 685 sequenced species of bacteria and archaea, including from seven dominant soil phyla, and we confirmed genes encoding this enzyme are abundant and expressed in terrestrial and marine environments. On this basis, we propose a new survival-centric model for the evolution of aerobic CO oxidation and conclude that, like atmospheric H

Indexed as

Aldehyde OxidoreductasesAtmosphereBacteriaBacterial ProteinsCarbon MonoxideMultienzyme ComplexesOxidation-ReductionPhylogenyProteomicsSoilSoil MicrobiologyAldehyde OxidoreductasesBacterial ProteinsCarbon Monoxidecarbon monoxide dehydrogenaseMultienzyme ComplexesSoil

Identifiers

PMID31358912
PMCPMC6794299

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.