Evidence map›Paper›PMID 31358833›Full record

ArticleScientific reports2019

Mitochondrial DNA sequencing reveals association of variants and haplogroup M33a2'3 with High altitude pulmonary edema susceptibility in Indian male lowlanders.

Swati Sharma, Sayar Singh, Rajinder K Gupta, Lilly Ganju, Shashi Bala Singh, Bhuvnesh Kumar, Yamini Singh

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.6field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Swati SharmaDefence Institute of Physiology and Allied Sciences, Timarpur, Delhi, 110054, India.
Sayar SinghDefence Institute of Physiology and Allied Sciences, Timarpur, Delhi, 110054, India.
Rajinder K GuptaDefence Institute of Physiology and Allied Sciences, Timarpur, Delhi, 110054, India.
Lilly GanjuDefence Institute of Physiology and Allied Sciences, Timarpur, Delhi, 110054, India.
Shashi Bala SinghNIPER, Hyderabad, Balanagar, Hyderabad, 500037, India.
Bhuvnesh KumarDefence Institute of Physiology and Allied Sciences, Timarpur, Delhi, 110054, India.
Yamini SinghDefence Institute of Physiology and Allied Sciences, Timarpur, Delhi, 110054, India. yamini29@gmail.com.
Defence Institute of Physiology and Allied Sciences · INNational Institute of Pharmaceutical Education and Research · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

High Altitude Pulmonary Edema (HAPE) is a threatening disorder caused due to acute exposure to high altitude above 3000 m. Apart from multiple factors involved, the genetic factors also play an important function in the pathogenesis of HAPE. This study aims to evaluate the role of mtDNA polymorphism and their association with haplogroup in understanding the etiology of HAPE. In this study, all the HAPE susceptible and acclimatized control subjects could be classified into nine haplogroups pertaining mostly to Macrohaplogroup M and U. The frequency of haplogroup M was significantly higher in HAPE susceptibles whereas the haplogroup M33a2'3 was found only in HAPE susceptibles. The variant G4491A and A4944G of MT-ND2, A14002G of MT-ND5, and C8562T of MT-ATP8, were definition site of haplogroup M33a2'3. The frequency of A10398G of MT-ND3, A8701G of MT-ATP6 and C14766T of MT-CYB genes were significantly higher in HAPE susceptibles. mtDNA copy number also plays a significant synergistic role in HAPE susceptibility. Our findings suggests that variants in MT-ND2 and MT-ND5 were predicted to confer decreased protein stability in HAPE susceptibles and in particular, highly conserved variants G4491A, A4944G and A14002G associated with haplogroup M33a2'3 may be the primary cause of susceptibility to HAPE in Indian male lowlanders.

Indexed as

Genetic Predisposition to DiseaseAltitude SicknessDNA, MitochondrialGenes, MitochondrialHaplotypesHumansHypertension, PulmonaryIndiaMaleMitochondriaPolymorphism, Single NucleotideDNA, Mitochondrial

Identifiers

PMID31358833
PMCPMC6662842
OpenAlexW2965269377

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.