Evidence map›Paper›PMID 31358790›Full record

ArticleScientific reports2019

Probing conformational changes of monomeric transthyretin with second derivative fluorescence.

Denisa Jazaj, Seyyed Abolghasem Ghadami, Francesco Bemporad, Fabrizio Chiti

Abstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Initiation of transthyretin aggregation at neutral pH by fluid agitation.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  5. Aggregation of Transthyretin by Fluid Agitation.bioRxiv : the preprint server for biology · 2024
    Article
  6. Understanding a Core Pilin of the Type IVa Pili ofJournal of microbiology and biotechnology · 2024
    Article
  7. Article
  8. Article
  9. Transthyretin Misfolding, A Fatal Structural Pathogenesis Mechanism.International journal of molecular sciences · 2021
    Review
  10. Article
  11. Review
  12. Article
  13. nanoDSF:Frontiers in microbiology · 2020
    Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Denisa JazajDipartimento di Scienze Biomediche Sperimentali e Cliniche "Mario Serio", Sezione di Scienze Biochimiche, Università degli Studi di Firenze, Viale Morgagni 50, 50134, Firenze, Italy.
Seyyed Abolghasem GhadamiDipartimento di Scienze Biomediche Sperimentali e Cliniche "Mario Serio", Sezione di Scienze Biochimiche, Università degli Studi di Firenze, Viale Morgagni 50, 50134, Firenze, Italy.
Francesco BemporadDipartimento di Scienze Biomediche Sperimentali e Cliniche "Mario Serio", Sezione di Scienze Biochimiche, Università degli Studi di Firenze, Viale Morgagni 50, 50134, Firenze, Italy.ORCID http://orcid.org/0000-0002-0643-6249
Fabrizio ChitiDipartimento di Scienze Biomediche Sperimentali e Cliniche "Mario Serio", Sezione di Scienze Biochimiche, Università degli Studi di Firenze, Viale Morgagni 50, 50134, Firenze, Italy. fabrizio.chiti@unifi.it.ORCID http://orcid.org/0000-0002-1330-1289

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We have studied the intrinsic fluorescence spectra of a monomeric variant of human transthyretin (M-TTR), a protein involved in the transport of the thyroid hormone and retinol and associated with various forms of amyloidosis, extending our analysis to the second order derivative of the spectra. This procedure allowed to identify three peaks readily assigned to Trp41, as the three peaks were also visible in a mutant lacking the other tryptophan (Trp79) and had similar FRET efficiency values with an acceptor molecule positioned at position 10. The wavelength values of the three peaks and their susceptibility to acrylamide quenching revealed that the three corresponding conformers experience different solvent-exposure, polarity of the environment and flexibility. We could monitor the three peaks individually in urea-unfolding and pH-unfolding curves. This revealed changes in the distribution of the corresponding conformers, indicating conformational changes and alterations of the dynamics of the microenvironment that surrounds the associated tryptophan residue in such transitions, but also native-like conformers of such residues in unfolded states. We also found that the amyloidogenic state adopted by M-TTR at mildly low pH has a structural and dynamical microenvironment surrounding Trp41 indistinguishable from that of the fully folded and soluble state at neutral pH.

Indexed as

FluorescenceFluorescence Resonance Energy TransferHumansHydrogen-Ion ConcentrationPoint MutationPrealbuminProtein ConformationProtein UnfoldingSpectrometry, FluorescenceThermodynamicsPrealbumin

Identifiers

PMID31358790
PMCPMC6662758

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.