Evidence map›Paper›PMID 31358280›Full record

ArticleHarmful algae2019

Evaluating putative ecological drivers of microcystin spatiotemporal dynamics using metabarcoding and environmental data.

A Banerji, M J Bagley, J A Shoemaker, D R Tettenhorst, C T Nietch, H J Allen, J W Santo Domingo

Abstract read
In one paragraph

Article in Harmful algae, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

A BanerjiUS Environmental Protection Agency, Cincinnati, OH, 45268, USA.
M J BagleyUS Environmental Protection Agency, Cincinnati, OH, 45268, USA.
J A ShoemakerUS Environmental Protection Agency, Cincinnati, OH, 45268, USA.
D R TettenhorstUS Environmental Protection Agency, Cincinnati, OH, 45268, USA.
C T NietchUS Environmental Protection Agency, Cincinnati, OH, 45268, USA.
H J AllenUS Environmental Protection Agency, Cincinnati, OH, 45268, USA.
J W Santo DomingoUS Environmental Protection Agency, Cincinnati, OH, 45268, USA. Electronic address: Santodomingo.Jorge@epa.gov.

Funding

Intramural EPA EPA999999
6 · The paper itself

Abstract

Microcystin is a cyanobacterial hepatotoxin of global concern. Understanding the environmental factors that cause high concentrations of microcystin is crucial to the development of lake management strategies that minimize harmful exposures. While the literature is replete with studies linking cyanobacterial production of microcystin to changes in various nutrients, abiotic stressors, grazers, and competitors, no single biotic or abiotic factor has been shown to be reliably predictive of microcystin concentrations in complex ecosystems. We performed random forest regression analyses with 16S and 18S rRNA gene sequencing data and environmental data to determine which putative ecological drivers best explained spatiotemporal variation in total microcystin and several individual congeners in a eutrophic freshwater reservoir. Model performance was best for predicting concentrations of the congener MC-LR, with ca. 88% of spatiotemporal variance explained. Most of the variance was associated with changes in the relative abundance of the cyanobacterial genus Microcystis. Follow-up RF regression analyses revealed that factors that were the most important in predicting MC-LR were also the most important in predicting Microcystis population dynamics. We discuss how these results relate to prevailing ecological hypotheses regarding the function of microcystin.

Indexed as

CyanobacteriaMicrocystisEcosystemLakesMicrocystinsMicrocystinsCyanobacteriaHarmful algal bloom (HAB)MetabarcodingMicrocystisRandom forest

Identifiers

PMID31358280
PMCPMC7877229

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.