Evidence map›Paper›PMID 31358115›Full record

ArticleeLife2019

Cell-sized confinement controls generation and stability of a protein wave for spatiotemporal regulation in cells.

Shunshi Kohyama, Natsuhiko Yoshinaga, Miho Yanagisawa, Kei Fujiwara, Nobuhide Doi

Abstract read
In one paragraph

Article in eLife, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Article
  2. Frontiers in cell and developmental biology · 2025
    Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Bridging scales in a multiscale pattern-forming system.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  10. Article
  11. Article
  12. Activation of a dilutedSTAR protocols · 2021
    Article
  13. Article
  14. Engineering spatiotemporal organization and dynamics in synthetic cells.Wiley interdisciplinary reviews. Nanomedicine and nanobiotechnology · 2021
    Review
  15. Article
  16. Article
  17. Article
  18. C-terminal eYFP fusion impairsOpen biology · 2020
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Shunshi KohyamaDepartment of Biosciences and Informatics, Keio University, Yokohama, Japan.ORCID 0000-0002-7588-2488
Natsuhiko YoshinagaMathematical Science Group, WPI Advanced Institute for Materials Research (WPI-AIMR), Tohoku University Katahira, Sendai, Japan.ORCID 0000-0001-9434-7010
Miho YanagisawaDepartment of Basic Science, Komaba Institute for Science, Graduate School of Arts and Sciences, The University of Tokyo, Tokyo, Japan.ORCID 0000-0001-7872-8286
Kei FujiwaraDepartment of Biosciences and Informatics, Keio University, Yokohama, Japan.ORCID 0000-0001-7308-774X
Nobuhide DoiDepartment of Biosciences and Informatics, Keio University, Yokohama, Japan.

Funding

Japan Society for the Promotion of Science JP15H00826Japan Society for the Promotion of Science JP15KT0081Japan Society for the Promotion of Science JP16H00793Japan Society for the Promotion of Science JP16H00809Japan Society for the Promotion of Science JP17K05605Japan Society for the Promotion of Science JP18H04565Japan Society for the Promotion of Science JP26650044Japan Society for the Promotion of Science JP26800219
6 · The paper itself

Abstract

The Min system, a system that determines the bacterial cell division plane, uses changes in the localization of proteins (a Min wave) that emerges by reaction-diffusion coupling. Although previous studies have shown that space sizes and boundaries modulate the shape and speed of Min waves, their effects on wave emergence were still elusive. Here, by using a microsized fully confined space to mimic live cells, we revealed that confinement changes the conditions for the emergence of Min waves. In the microsized space, an increased surface-to-volume ratio changed the localization efficiency of proteins on membranes, and therefore, suppression of the localization change was necessary for the stable generation of Min waves. Furthermore, we showed that the cell-sized space strictly limits parameters for wave emergence because confinement inhibits both the instability and excitability of the system. These results show that confinement of reaction-diffusion systems has the potential to control spatiotemporal patterns in live cells.

Indexed as

Cell DivisionGene Expression RegulationCell Cycle ProteinsEscherichia coli ProteinsModels, TheoreticalProtein TransportSpatio-Temporal AnalysisCell Cycle ProteinsEscherichia coli Proteinsartificial cellsconfinementE. coliMin systemphysics of living systemsprotein wavereaction-diffusionspatiotemporal regulation

Identifiers

PMID31358115
PMCPMC6667215

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.