Evidence map›Paper›PMID 31357699›Full record

ArticleAnimals : an open access journal from MDPI2019

MicroRNA Sequencing Reveals the Effect of Different Levels of Non-Fibrous Carbohydrate/Neutral Detergent Fiber on Rumen Development in Calves.

Mingming Xue, Kejun Wang, Ansi Wang, Ruiting Li, Yadong Wang, Shuaijie Sun, Duo Yan, Guohua Song, Huifen Xu, Guirong Sun and 1 more

Open access · goldAbstract read
In one paragraph

Article in Animals : an open access journal from MDPI, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Mingming XueCollege of Animal Science and Veterinary Medicine, Henan Agricultural University, Zhengzhou 450046, China.
Kejun WangCollege of Animal Science and Veterinary Medicine, Henan Agricultural University, Zhengzhou 450046, China.ORCID 0000-0003-4337-980X
Ansi WangCollege of Animal Science and Veterinary Medicine, Henan Agricultural University, Zhengzhou 450046, China.
Ruiting LiCollege of Animal Science and Veterinary Medicine, Henan Agricultural University, Zhengzhou 450046, China.
Yadong WangCollege of Animal Science and Veterinary Medicine, Henan Agricultural University, Zhengzhou 450046, China.
Shuaijie SunCollege of Animal Science and Veterinary Medicine, Henan Agricultural University, Zhengzhou 450046, China.
Duo YanCollege of Animal Science and Veterinary Medicine, Henan Agricultural University, Zhengzhou 450046, China.
Guohua SongCollege of Animal Science and Veterinary Medicine, Henan Agricultural University, Zhengzhou 450046, China.
Huifen XuCollege of Animal Science and Veterinary Medicine, Henan Agricultural University, Zhengzhou 450046, China.
Guirong SunCollege of Animal Science and Veterinary Medicine, Henan Agricultural University, Zhengzhou 450046, China. 13803849306@163.com.
Ming LiCollege of Animal Science and Veterinary Medicine, Henan Agricultural University, Zhengzhou 450046, China. grsun2000@126.com.ORCID 0000-0002-2141-913X
Henan Agricultural University · CN

Funding

the Special Fund for Henan Agriculture Research System S2013-08-G01
6 · The paper itself

Abstract

Rumen development in calves is affected by many factors, including dietary composition. MicroRNAs (miRNAs) are known to function in the development of the rumen in cattle, what is not known is how these miRNAs function in rumen development of calves fed with high and low ratios of non-fibrous carbohydrate (NFC)/neutral detergent fiber (NDF). A total of six healthy Charolais hybrids bull calves of similar weight were divided into two groups; three calves were fed a mixed diet with NFC/NDF = 1.35 (H group), and three were fed a mixed diet with NFC/NDF = 0.80 (L group). After 105 days on the diet, calves were sacrificed and rumen tissues were collected. Tissues were subjected to histological observation and miRNA expression analysis. Functional enrichment analysis was conducted on the target genes of the miRNAs. Targeting and regulatory relationships were verified by luciferase reporter assay and quantitative PCR (qPCR). We found that the length of rumen papilla in the L group was significantly greater than that in the H group, while the width of rumen papilla in H group was significantly greater than that that in L group. We identified 896 miRNAs; 540 known miRNAs, and 356 novel predicted miRNAs. After statistical testing, we identified 24 differentially expressed miRNAs (DEmiRNAs). miRNA-mRNA-cluster network analysis and literature reviews revealed that cell proliferation, differentiation, physical and nutrient stimuli processes participate in rumen development under different NFC/NDF levels. The regulatory relationships between three DEmiRNAs and five target genes were verified by examining the levels of expression. The binding sites on bta-miR-128 for the peroxisome proliferator activated receptor gamma (

Indexed as

calfmiRNApapillarumen

Identifiers

PMID31357699
PMCPMC6720277
OpenAlexW2964444216

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.