Evidence map›Paper›PMID 31357479›Full record

ArticleViruses2019

Two Novel Negative-Sense RNA Viruses Infecting Grapevine Are Members of a Newly Proposed Genus within the Family Phenuiviridae.

Alfredo Diaz-Lara, Beatriz Navarro, Francesco Di Serio, Kristian Stevens, Min Sook Hwang, Joshua Kohl, Sandra Thuy Vu, Bryce W Falk, Deborah Golino, Maher Al Rwahnih

Abstract read
In one paragraph

Article in Viruses, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Alfredo Diaz-LaraDepartment of Plant Pathology, University of California-Davis, Davis, CA 95616, USA.
Beatriz NavarroIstituto per la Protezione Sostenibile delle Piante, Consiglio Nazionale delle Ricerche, 70126 Bari, Italy.ORCID 0000-0001-8981-1018
Francesco Di SerioIstituto per la Protezione Sostenibile delle Piante, Consiglio Nazionale delle Ricerche, 70126 Bari, Italy.ORCID 0000-0003-2822-704X
Kristian StevensDepartment of Evolution and Ecology, University of California-Davis, Davis, CA 95616, USA.
Min Sook HwangFoundation Plant Services, University of California-Davis, Davis, CA 95616, USA.
Joshua KohlFoundation Plant Services, University of California-Davis, Davis, CA 95616, USA.
Sandra Thuy VuDepartment of Plant Pathology, University of California-Davis, Davis, CA 95616, USA.
Bryce W FalkDepartment of Plant Pathology, University of California-Davis, Davis, CA 95616, USA.
Deborah GolinoDepartment of Plant Pathology, University of California-Davis, Davis, CA 95616, USA.
Maher Al RwahnihDepartment of Plant Pathology, University of California-Davis, Davis, CA 95616, USA. malrwahnih@ucdavis.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Two novel negative-stranded (ns)RNA viruses were identified by high throughput sequencing in grapevine. The genomes of both viruses, named grapevine Muscat rose virus (GMRV) and grapevine Garan dmak virus (GGDV), comprise three segments with each containing a unique gene. Based on sequence identity and presence of typical domains/motifs, the proteins encoded by the two viruses were predicted to be: RNA-dependent RNA polymerase (RdRp), nucleocapsid protein (NP), and putative movement protein (MP). These proteins showed the highest identities with orthologs in the recently discovered apple rubbery wood viruses 1 and 2, members of a tentative genus (Rubodvirus) within the family

Indexed as

PhylogenyEvolution, MolecularGenome, ViralHigh-Throughput Nucleotide SequencingNucleocapsid ProteinsPlant DiseasesPlant VirusesRNA, ViralRNA VirusesSequence Analysis, DNAVitisNucleocapsid ProteinsRNA, Viraldetectionevolutiongrapevinehigh throughput sequencingnsRNA virusesPhenuiviridaephylogeneticstransmission

Identifiers

PMID31357479
PMCPMC6724010

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.