Evidence map›Paper›PMID 31356000›Full record

ArticleAmerican journal of medical genetics. Part A2019

Fragile X syndrome in a male with methylated premutation alleles and no detectable methylated full mutation alleles.

Bruce Hayward, Inna Loutaev, Xiaohua Ding, Sarah L Nolin, Audrey Thurm, Karen Usdin, Carolyn B Smith

Open access · greenAbstract readCase Reports
In one paragraph

Article in American journal of medical genetics. Part A, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Decreased rates of cerebral protein synthesis in conscious young adults with fragile X syndrome demonstrated by L-[1-Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism · 2022
    Article
  5. Mechanisms of theInternational journal of molecular sciences · 2022
    Review
  6. Review
  7. Article
  8. Molecular analysis ofExpert review of molecular diagnostics · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Bruce HaywardSection on Gene Structure and Disease, Laboratory of Cell and Molecular Biology, National Institute of Diabetes, Digestive and Kidney Diseases, National Institutes of Health, Bethesda, Maryland.
Inna LoutaevSection on Neuroadaptation and Protein Metabolism, National Institute of Mental Health, National Institutes of Health, Bethesda, Maryland.
Xiaohua DingMolecular Diagnostic Laboratory, New York State Institute for Basic Research in Developmental Disabilities, Staten Island, New York.
Sarah L NolinMolecular Diagnostic Laboratory, New York State Institute for Basic Research in Developmental Disabilities, Staten Island, New York.
Audrey ThurmOffice of the Clinical Director, National Institute of Mental Health, National Institutes of Health, Bethesda, Maryland.
Karen UsdinSection on Gene Structure and Disease, Laboratory of Cell and Molecular Biology, National Institute of Diabetes, Digestive and Kidney Diseases, National Institutes of Health, Bethesda, Maryland.
Carolyn B SmithSection on Neuroadaptation and Protein Metabolism, National Institute of Mental Health, National Institutes of Health, Bethesda, Maryland.ORCID 0000-0002-2722-0180
National Institutes of Health · USNew York State Office for People With Developmental Disabilities · US

Funding

Studies On Protein Synthesis And Long-Term Adaptive Responses in the CNSZIAMH000889 · NIMH · NATIONAL INSTITUTE OF MENTAL HEALTH · PI BEEBE SMITH, CAROLYN · 2009 to 2021
$18.6M
Understanding the mutational mechanism responsible for the Repeat Expansion DiseasesZIADK057808 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI USDIN, KAREN P. · 2009 to 2025
$14.1M
Neurodevelopmental and Behavioral Phenotyping ZICMH002961 · NIMH · NATIONAL INSTITUTE OF MENTAL HEALTH · PI THURM, AUDREY · 2017 to 2025
$12.6M
The pathology consequences of repeat expansion in the Repeat Expansion DiseasesZIADK057602 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI USDIN, KAREN P. · 2009 to 2025
$11.5M
Disease pathology in the Fragile X-associated disordersZIADK057809 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI USDIN, KAREN P. · 2009 to 2013
$1.6M
THE TRIPLET EXPANSION DISEASESZ01DK057602 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI USDIN, KAREN P. · 1997 to 2008
$624k
Intramural NIH HHS Z01 DK057602Intramural NIH HHS ZIA DK057602Intramural NIH HHS ZIA DK057808Intramural NIH HHS ZIA DK057809Intramural NIH HHS ZIA MH000889New York State Institute for Basic Research in Developmental DisabilitiesNew York State Office for People with Developmental DisabilitiesNIDDK NIH HHS DK057602NIMH NIH HHS MH00088936
6 · The paper itself

Abstract

Most cases of fragile X syndrome (FXS) result from aberrant methylation of the FMR1 gene. Methylation occurs when the number of tandemly arranged cytosine guanine guanine (CGG)-repeats in the 5' end of the transcriptional unit of FMR1 exceeds a certain critical threshold, thought to be between 200 and 400 repeats. Such alleles are referred to as full mutation (FM) alleles. Premutation (PM) alleles, alleles with 55-200 repeats, are generally not aberrantly methylated and in fact may have hyperexpression of the FMR1 mRNA. We describe here a male who meets the diagnostic criteria for FXS, who is highly mosaic with a mixture of multiple PM and FM alleles and 50% methylation. However, the methylated alleles are limited to two alleles in the PM range, ~165 and ~175 repeats respectively, with the FM alleles being unmethylated. This finding has implications for FXS diagnosis as well as for efforts to delete the repeat in individuals with FXS using a CRISPR-Cas9 approach.

Indexed as

AllelesChild, PreschoolDNA MethylationFragile X Messenger Ribonucleoprotein 1Fragile X SyndromeHumansMaleMutationYoung AdultFragile X Messenger Ribonucleoprotein 1FMR1fragile X syndromegene methylationpremutation allele

Identifiers

PMID31356000
PMCPMC9423038
OpenAlexW2965117567

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.