Evidence map›Paper›PMID 31355128›Full record

ArticleTheoretical and experimental plant physiology2019

What proteomics can reveal about plant-virus interactions? Photosynthesis-related proteins on the spotlight.

Pedro F N Souza, Hernan Garcia-Ruiz, Fabricio E L Carvalho

Open access · greenAbstract read
In one paragraph

Article in Theoretical and experimental plant physiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 42 citations in OpenAlex.

  1. Infection with Tomato Mosaic Virus inInternational journal of molecular sciences · 2026
    Article
  2. Article
  3. Singlet Oxygen Generation and Signaling in Higher Plants.International journal of molecular sciences · 2026
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Plants (Basel, Switzerland) · 2025
    Article
  9. Review
  10. Plant stress and proteomics in medicinal plants.Frontiers in plant science · 2025
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Frontiers in plant science · 2022
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Pedro F N SouzaDepartment of Plant Pathology, Nebraska Center for Virology, University of Nebraska-Lincoln, Lincoln, NE, USA.
Hernan Garcia-RuizDepartment of Plant Pathology, Nebraska Center for Virology, University of Nebraska-Lincoln, Lincoln, NE, USA.
Fabricio E L CarvalhoDepartment of Biochemistry and Molecular Biology, Federal University of Ceará, Fortaleza, Ceará, Brazil.
Universidade Federal do Ceará · BRUniversity of Nebraska–Lincoln · US

Funding

Recognition and recruitment of RNA viruses into RNA silencing pathwaysR01GM120108 · NIGMS · UNIVERSITY OF NEBRASKA LINCOLN · PI GARCIA-RUIZ, HERNAN · 2016 to 2020
$1.3M
NIGMS NIH HHS R01 GM120108
6 · The paper itself

Abstract

Plant viruses are responsible for losses in worldwide production of numerous economically important food and fuel crops. As obligate cellular parasites with very small genomes, viruses rely on their hosts for replication, assembly, intra- and intercellular movement, and attraction of vectors for dispersal. Chloroplasts are photosynthesis and are the site of replication for several viruses. When viruses replicate in chloroplasts, photosynthesis, an essential process in plant physiology, is inhibited. The mechanisms underlying molecular and biochemical changes during compatible and incompatible plants-virus interactions, are only beginning to be elucidated, including changes in proteomic profiles induced by virus infections. In this review, we highlight the importance of proteomic studies to understand plant-virus interactions, especially emphasizing the changes in photosynthesis-related protein accumulation. We focus on: (a) chloroplast proteins that differentially accumulate during viral infection; (b) the significance with respect to chloroplast-virus interaction; and (c) alterations in plant's energetic metabolism and the subsequently the plant defense mechanisms to overcome viral infection.

Indexed as

PhotosynthesisPlant–virus interactionsProteomeProteomicsVirus replication in chloroplasts

Identifiers

PMID31355128
PMCPMC6660014
OpenAlexW2913396195

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.