Evidence map›Paper›PMID 31354748›Full record

ReviewFrontiers in plant science2019

Data Mining by Pluralistic Approach on CRISPR Gene Editing in Plants.

Tanushri Kaul, Nitya Meenakshi Raman, Murugesh Eswaran, Arulprakash Thangaraj, Rachana Verma, Sonia Khan Sony, Krishnamurthy M Sathelly, Rashmi Kaul, Pranjal Yadava, Pawan Kumar Agrawal

Open access · goldAbstract readReview
In one paragraph

Review in Frontiers in plant science, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Transformation and gene editing in the bioenergy grass Miscanthus.Biotechnology for biofuels and bioproducts · 2022
    Article
  5. Article
  6. Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Tanushri KaulNutritional Improvement of Crops Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, India.
Nitya Meenakshi RamanNutritional Improvement of Crops Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, India.
Murugesh EswaranNutritional Improvement of Crops Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, India.
Arulprakash ThangarajNutritional Improvement of Crops Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, India.
Rachana VermaNutritional Improvement of Crops Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, India.
Sonia Khan SonyNutritional Improvement of Crops Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, India.
Krishnamurthy M SathellyNutritional Improvement of Crops Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, India.
Rashmi KaulNutritional Improvement of Crops Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, India.
Pranjal YadavaDepartment of Biotechnology, Indian Institute of Maize Research, Indian Institute of Agricultural Biotechnology (ICAR), New Delhi, India.
Pawan Kumar AgrawalNational Agricultural Science Fund, Indian Council of Agricultural Research, New Delhi, India.
International Centre for Genetic Engineering and Biotechnology · INICAR-Indian Institute of Maize Research · INIndian Council of Agricultural Research · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genome engineering by site-specific nucleases enables reverse genetics and targeted editing of genomes in an efficacious manner. Contemporary revolutionized progress in targeted-genome engineering technologies based on Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)-related RNA-guided endonucleases facilitate coherent interrogation of crop genome function. Evolved as an innate component of the adaptive immune response in bacterial and archaeal systems, CRISPR/Cas system is now identified as a versatile molecular tool that ensures specific and targeted genome modification in plants. Applications of this genome redaction tool-kit include somatic genome editing, rectification of genetic disorders or gene therapy, treatment of infectious diseases, generation of animal models, and crop improvement. We review the utilization of these synthetic nucleases as precision, targeted-genome editing platforms with the inherent potential to accentuate basic science "strengths and shortcomings" of gene function, complement plant breeding techniques for crop improvement, and charter a knowledge base for effective use of editing technology for ever-increasing agricultural demands. Furthermore, the emerging importance of Cpf1, Cas9 nickase, C2c2, as well as other innovative candidates that may prove more effective in driving novel applications in crops are also discussed. The mined data has been prepared as a library and opened for public use at www.lipre.org.

Indexed as

C2c2Cas13Cas9double-stranded breakgenomehomology-directed repairnon-homologous end joining repairsgRNA

Identifiers

PMID31354748
PMCPMC6632506
OpenAlexW2959650322

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.