Evidence map›Paper›PMID 31353791›Full record

ArticleEMBO reports2019

The novel lncRNA CALIC upregulates AXL to promote colon cancer metastasis.

Yoshihiro Kawasaki, Masaya Miyamoto, Takeaki Oda, Kosuke Matsumura, Lumi Negishi, Ryuichiro Nakato, Sakiko Suda, Naoko Yokota, Katsuhiko Shirahige, Tetsu Akiyama

Open access · bronzeAbstract read
In one paragraph

Article in EMBO reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. LncRNAPNAS nexus · 2023
    Article
  6. Review
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. Measuring lncRNA Expression by Real-Time PCR.Methods in molecular biology (Clifton, N.J.) · 2021
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 2 countries.

Yoshihiro KawasakiLaboratory of Molecular and Genetic Information, Institute for Quantitative Biosciences, The University of Tokyo, Bunkyo-ku, Tokyo, Japan.ORCID 0000-0001-5212-4281
Masaya MiyamotoLaboratory of Molecular and Genetic Information, Institute for Quantitative Biosciences, The University of Tokyo, Bunkyo-ku, Tokyo, Japan.
Takeaki OdaLaboratory of Molecular and Genetic Information, Institute for Quantitative Biosciences, The University of Tokyo, Bunkyo-ku, Tokyo, Japan.
Kosuke MatsumuraLaboratory of Molecular and Genetic Information, Institute for Quantitative Biosciences, The University of Tokyo, Bunkyo-ku, Tokyo, Japan.
Lumi NegishiLaboratory of Molecular and Genetic Information, Institute for Quantitative Biosciences, The University of Tokyo, Bunkyo-ku, Tokyo, Japan.
Ryuichiro NakatoLaboratory of Genome Structure and Function, Institute for Quantitative Biosciences, The University of Tokyo, Bunkyo-ku, Tokyo, Japan.
Sakiko SudaLaboratory of Molecular and Genetic Information, Institute for Quantitative Biosciences, The University of Tokyo, Bunkyo-ku, Tokyo, Japan.
Naoko YokotaLaboratory of Genome Structure and Function, Institute for Quantitative Biosciences, The University of Tokyo, Bunkyo-ku, Tokyo, Japan.
Katsuhiko ShirahigeLaboratory of Genome Structure and Function, Institute for Quantitative Biosciences, The University of Tokyo, Bunkyo-ku, Tokyo, Japan.
Tetsu AkiyamaLaboratory of Molecular and Genetic Information, Institute for Quantitative Biosciences, The University of Tokyo, Bunkyo-ku, Tokyo, Japan.ORCID 0000-0002-4215-5073
Quantitative BioSciences · US

Funding

Japan Agency for Medical Research and Development (AMED) 17cm0106103h0002MEXT|Japan Science and Technology Agency (JST) JPMJCR1863MEXT|Japan Society for the Promotion of Science (JSPS) 16H04692MEXT|Japan Society for the Promotion of Science (JSPS) 17H06325Yasuda Memorial Medical Foundation (Yoshihiro Kawasaki)
6 · The paper itself

Abstract

Long non-coding RNAs (lncRNAs) are aberrantly expressed in many disease conditions, including cancer. Accumulating evidence indicates that some lncRNAs may play critical roles in cancer progression and metastasis. Here, we identify a set of lncRNAs that are upregulated in metastatic subpopulations isolated from colon cancer HCT116 cells in vivo and show that one of these lncRNAs, which we name CALIC, is required for the metastatic activity of colon cancer cells. We show that CALIC associates with the RNA-binding protein hnRNP-L and imparts specificity to hnRNP-L-mediated gene expression. Furthermore, we demonstrate that the CALIC/hnRNP-L complex upregulates the tyrosine kinase receptor AXL and that knockdown of CALIC or AXL using shRNA in colon cancer cells attenuates their ability to form metastases in mice. These results suggest that the CALIC/hnRNP-L complex enhances the metastatic potential of colon cancer cells.

Indexed as

Gene Expression Regulation, NeoplasticAnimalsAxl Receptor Tyrosine KinaseCell ProliferationColonic NeoplasmsDisease ProgressionFemaleHCT116 CellsHeterogeneous-Nuclear Ribonucleoprotein LHumansLiver NeoplasmsLymphatic MetastasisMiceMice, Inbred BALB CMice, NudeProtein BindingAxl Receptor Tyrosine KinaseHeterogeneous-Nuclear Ribonucleoprotein LHNRNPL protein, humanProto-Oncogene ProteinsReceptor Protein-Tyrosine KinasesRibonucleoproteinsRNA, Long NoncodingRNA, Small Interferingcancer metastasislncRNAsignal transduction

Identifiers

PMID31353791
PMCPMC6680119
OpenAlexW2964954309

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.