Evidence map›Paper›PMID 31352081›Full record

ArticleInternational journal of radiation oncology, biology, physics2019

Salivary Metabolomics of Total Body Irradiated Nonhuman Primates Reveals Long-Term Normal Tissue Responses to Radiation.

Evagelia C Laiakis, Denise Nishita, Kim Bujold, Meth M Jayatilake, James Bakke, Janet Gahagen, Simon Authier, Polly Chang, Albert J Fornace

Abstract read
In one paragraph

Article in International journal of radiation oncology, biology, physics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
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  6. Article
  7. The NIAID/RNCP Biodosimetry Program: An Overview.Cytogenetic and genome research · 2023
    Review
  8. Article
  9. Article
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  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. Citrulline, A Potential Biomarker of Radiation-Induced Small Intestine Damage.Dose-response : a publication of International Hormesis Society
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Evagelia C LaiakisDepartment of Oncology, Lombardi Comprehensive Cancer Center, Georgetown University, Washington, DC; Department of Biochemistry and Molecular & Cellular Biology, Georgetown University, Washington, DC. Electronic address: ecl28@georgetown.edu.
Denise NishitaSRI International, BioSciences Division, Menlo Park, California.
Kim BujoldCiToxlab, Montreal, Canada.
Meth M JayatilakeDepartment of Biochemistry and Molecular & Cellular Biology, Georgetown University, Washington, DC.
James BakkeSRI International, BioSciences Division, Menlo Park, California.
Janet GahagenSRI International, BioSciences Division, Menlo Park, California.
Simon AuthierCiToxlab, Montreal, Canada.
Polly ChangSRI International, BioSciences Division, Menlo Park, California.
Albert J FornaceDepartment of Oncology, Lombardi Comprehensive Cancer Center, Georgetown University, Washington, DC; Department of Biochemistry and Molecular & Cellular Biology, Georgetown University, Washington, DC.

Funding

Sample Engineering CoreU19AI067773 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI FORNACE, ALBERT J · 2005 to 2024
$105.4M
Tissue Culture Shared ResourceP30CA051008 · NCI · GEORGETOWN UNIVERSITY · PI Louis M Weiner · 1990 to 2026
$71.5M
NCI NIH HHS P30 CA051008NIAID NIH HHS U19 AI067773
6 · The paper itself

Abstract

purposeTo identify metabolomic biomarkers of acute radiation exposure in saliva that show time-dependent changes. METHODS AND MATERIALS: Nonhuman primates were exposed to 4 Gy of total body irradiation with γ-rays. Saliva was collected from 7 animals twice before and at days 1, 3, 5, 7, 15, 21, 28, and 60 after irradiation. Profiling was conducted with liquid chromatography time-of-flight mass spectrometry. Multivariate data analysis and potential biomarker identification was conducted through random Forests and the software MetaboAnalyst. Candidate biomarkers were validated through tandem mass spectrometry, and receiver operating characteristic curves were constructed to show the diagnostic ability of the signature over time.

resultsUntargeted metabolomic analysis revealed significant and persistent effects up to the 60 days evaluated in this study. Biomarkers spanning primarily amino acids and nucleotides were identified, with a significant number showing long-term responses. Fifteen biomarkers showed high statistical significance in the first week after irradiation and 16 at >7 days after irradiation (false discovery rate-adjusted P < .05). The combination of the biomarkers in a single biosignature was able to accurately show the diagnostic ability of the signature in a binary classifier system with receiver operating characteristic curves.

conclusionsRadiation can alter the metabolome in saliva, and metabolomics could effectively be used to monitor radiation responses, as a biodosimetry method, in the event of a radiological incident. Saliva metabolomics also has potential relevance in a clinical setting.

Indexed as

Whole-Body IrradiationAmino AcidsAnimalsBiomarkersChromatography, LiquidFemaleGamma RaysMacaca mulattaMaleMetabolomeMetabolomicsMultivariate AnalysisNucleotidesRadiation DosageRadiation ExposureROC CurveAmino AcidsBiomarkersNucleotides

Identifiers

PMID31352081
PMCPMC6815709

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.