Evidence map›Paper›PMID 31350309›Full record

Trial reportThe Journal of experimental medicine2019

Combination of quadruplex qPCR and next-generation sequencing for qualitative and quantitative analysis of the HIV-1 latent reservoir.

Christian Gaebler, Julio C C Lorenzi, Thiago Y Oliveira, Lilian Nogueira, Victor Ramos, Ching-Lan Lu, Joy A Pai, Pilar Mendoza, Mila Jankovic, Marina Caskey and 1 more

Abstract readClinical Trial
In one paragraph

Trial report in The Journal of experimental medicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 80 papers.

0numbers the graph read from it
0cells of the map it votes in
80citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

80 citing papers in PubMed.

  1. Trial
  2. Article
  3. The immunophenotype and proviral landscape of HIV-infected CD4 T cells during antiretroviral therapy.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
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20 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Christian GaeblerLaboratory of Molecular Immunology, The Rockefeller University, New York, NY.ORCID 0000-0001-7295-8128
Julio C C LorenziLaboratory of Molecular Immunology, The Rockefeller University, New York, NY.
Thiago Y OliveiraLaboratory of Molecular Immunology, The Rockefeller University, New York, NY.
Lilian NogueiraLaboratory of Molecular Immunology, The Rockefeller University, New York, NY.ORCID 0000-0001-8168-2629
Victor RamosLaboratory of Molecular Immunology, The Rockefeller University, New York, NY.ORCID 0000-0001-7353-3420
Ching-Lan LuLaboratory of Molecular Immunology, The Rockefeller University, New York, NY.
Joy A PaiLaboratory of Molecular Immunology, The Rockefeller University, New York, NY.ORCID 0000-0003-3580-8061
Pilar MendozaLaboratory of Molecular Immunology, The Rockefeller University, New York, NY.
Mila JankovicLaboratory of Molecular Immunology, The Rockefeller University, New York, NY.ORCID 0000-0001-9696-5234
Marina CaskeyLaboratory of Molecular Immunology, The Rockefeller University, New York, NY.
Michel C NussenzweigLaboratory of Molecular Immunology, The Rockefeller University, New York, NY nussen@rockefeller.edu.ORCID 0000-0003-0592-8564

Funding

Support Component D/Vaccine Discovery, Concept to ClinicUM1AI100663 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI AHMED, RAFI · 2012 to 2018
$131.5M
Developing, Demonstrating, and Disseminating Innovative Programs to Achieve Translational SuccessUL1TR001866 · NCATS · ROCKEFELLER UNIVERSITY · PI COLLER, BARRY, KRUEGER, JAMES G · 2016 to 2025
$40.6M
Patient and Population Health Outcomes Research SWGP30AI124414 · NIAID · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI Kathryn M. Anastos · 2017 to 2026
$28.3M
First-in-human study of two anti-SARS CoV-2 antibodies in health volunteersUM1AI126620 · NIAID · WISTAR INSTITUTE · PI MONTANER, LUIS J, RILEY, JAMES L. · 2016 to 2021
$24.5M
Optimization of Fc effector activity of anti-HIV antibodies to target HIV reservoirR01AI129795 · NIAID · ROCKEFELLER UNIVERSITY · PI NUSSENZWEIG, MICHEL C, RAVETCH, JEFFREY VICTOR · 2017 to 2021
$4.2M
NCATS NIH HHS UL1 TR001866NIAID NIH HHS P30 AI124414NIAID NIH HHS R01 AI129795NIAID NIH HHS UM1 AI100663NIAID NIH HHS UM1 AI126620
6 · The paper itself

Abstract

HIV-1 infection requires lifelong therapy with antiretroviral drugs due to the existence of a latent reservoir of transcriptionally inactive integrated proviruses. The goal of HIV-1 cure research is to eliminate or functionally silence this reservoir. To this end, there are numerous ongoing studies to evaluate immunological approaches, including monoclonal antibody therapies. Evaluating the results of these studies requires sensitive and specific measures of the reservoir. Here, we describe a relatively high-throughput combined quantitative PCR (qPCR) and next-generation sequencing method. Four different qPCR probes covering the packaging signal (PS), group-specific antigen (

Indexed as

Genome, ViralHigh-Throughput Nucleotide SequencingReal-Time Polymerase Chain ReactionAnti-Retroviral AgentsFemaleHIV-1HIV InfectionsHumansMaleViral ProteinsAnti-Retroviral AgentsViral Proteins

Identifiers

PMID31350309
PMCPMC6781006

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.