Evidence map›Paper›PMID 31350176›Full record

ArticleImmunity2019

The Histone Methyltransferase Setdb2 Modulates Macrophage Phenotype and Uric Acid Production in Diabetic Wound Repair.

Andrew S Kimball, Frank M Davis, Aaron denDekker, Amrita D Joshi, Matthew A Schaller, Jennifer Bermick, Xianying Xing, Charles F Burant, Andrea T Obi, Dylan Nysz and 8 more

Open access · bronzeAbstract read
In one paragraph

Article in Immunity, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 88 papers.

0numbers the graph read from it
0cells of the map it votes in
88citing papers in PubMed
9.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

88 citing papers in PubMed, 159 citations in OpenAlex.

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  15. Clinical severity-dependent virulence ofFrontiers in cellular and infection microbiology · 2026
    Article
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28 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

18 authors at 3 institutions in 1 country.

Andrew S KimballDepartment of Surgery, University of Michigan, Ann Arbor, MI, USA.
Frank M DavisDepartment of Surgery, University of Michigan, Ann Arbor, MI, USA.
Aaron denDekkerDepartment of Surgery, University of Michigan, Ann Arbor, MI, USA; Department of Pathology, University of Michigan, Ann Arbor, MI, USA.
Amrita D JoshiDepartment of Surgery, University of Michigan, Ann Arbor, MI, USA.
Matthew A SchallerDepartment of Immunology, University of Florida, Gainesville, FL, USA.
Jennifer BermickDepartment of Pediatrics, University of Michigan, Ann Arbor, MI, USA.
Xianying XingDepartment of Dermatology, University of Michigan, Ann Arbor, MI, USA.
Charles F BurantDepartment of Internal Medicine, University of Michigan, Ann Arbor, MI, USA.
Andrea T ObiDepartment of Surgery, University of Michigan, Ann Arbor, MI, USA.
Dylan NyszDepartment of Surgery, University of Michigan, Ann Arbor, MI, USA.
Scott RobinsonDepartment of Surgery, University of Michigan, Ann Arbor, MI, USA.
Ron AllenDepartment of Pathology, University of Michigan, Ann Arbor, MI, USA.
Nicholas W LukacsDepartment of Pathology, University of Michigan, Ann Arbor, MI, USA.
Peter K HenkeDepartment of Surgery, University of Michigan, Ann Arbor, MI, USA.
Johann E GudjonssonDepartment of Dermatology, University of Michigan, Ann Arbor, MI, USA.
Bethany B MooreDepartment of Internal Medicine, University of Michigan, Ann Arbor, MI, USA; Department of Microbiology and Immunology, University of Michigan, Ann Arbor, MI, USA.
Steve L KunkelDepartment of Pathology, University of Michigan, Ann Arbor, MI, USA.
Katherine A GallagherDepartment of Surgery, University of Michigan, Ann Arbor, MI, USA; Department of Microbiology and Immunology, University of Michigan, Ann Arbor, MI, USA. Electronic address: kgallag@med.umich.edu.
University of Michigan–Ann Arbor · USMichigan Medicine · USUniversity of Florida · US

Funding

Regional Pilot And Feasibility Study Grants ProgramP30DK020572 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Mehboob A Hussain · 2013 to 2026
$24.3M
Pilot and Feasibility (P and F) ProgramP30DK089503 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Kanakadurga Singer · 2010 to 2026
$20.3M
University of Michigan Skin Biology and Diseases Resource-based CenterP30AR075043 · NIAMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Johann Eli Gudjonsson · 2019 to 2026
$6.6M
The Role of C-C Chemokines in Eosinophil Airway InflammationR01AI036302 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI LUKACS, NICHOLAS W · 2001 to 2018
$5.6M
NIDDK Diabetic Foot Consortium Clinical Research UnitU01DK119083 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI RODICA BUSUI (POP-BUSUI), Crystal Murray Holmes · 2018 to 2026
$5.5M
Immunobiology of Lung Injury and FibrosisR35HL144481 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MOORE, BETHANY B. · 2019 to 2024
$5.2M
The Interferon-beta (IFN-beta)/SETDB2 Epigenetic Axis Regulates Inflammation And Metabolism In Diabetic WoundsR01HL137919 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI GALLAGHER, KATHERINE ANN · 2017 to 2021
$2.4M
miR-29b and autophagy regulate alveolar macrophage function post-BMTR01AI117229 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MOORE, BETHANY B. · 2015 to 2019
$2.2M
Vascular Surgery: Research Training in Vascular BiologyT32HL076123 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI HENKE, PETER K, WAKEFIELD, THOMAS WILLIAM · 2004 to 2019
$1.9M
Palmitate Regulates JMJD3 Epigenetic Alterations in Macrophages and Directs Wound HealingF32DK117545 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI DAVIS, FRANK MICHAEL · 2018 to 2019
$128k
NHLBI NIH HHS R01 HL137919NHLBI NIH HHS R35 HL144481NHLBI NIH HHS T32 HL076123NIAID NIH HHS R01 AI036302NIAID NIH HHS R01 AI117229NIAMS NIH HHS P30 AR075043NIDDK NIH HHS F32 DK117545NIDDK NIH HHS P30 DK020572NIDDK NIH HHS P30 DK089503NIDDK NIH HHS U01 DK119083
6 · The paper itself

Abstract

Macrophage plasticity is critical for normal tissue repair to ensure transition from the inflammatory to the proliferative phase of healing. We examined macrophages isolated from wounds of patients afflicted with diabetes and of healthy controls and found differential expression of the methyltransferase Setdb2. Myeloid-specific deletion of Setdb2 impaired the transition of macrophages from an inflammatory phenotype to a reparative one in normal wound healing. Mechanistically, Setdb2 trimethylated histone 3 at NF-κB binding sites on inflammatory cytokine gene promoters to suppress transcription. Setdb2 expression in wound macrophages was regulated by interferon (IFN) β, and under diabetic conditions, this IFNβ-Setdb2 axis was impaired, leading to a persistent inflammatory macrophage phenotype in diabetic wounds. Setdb2 regulated the expression of xanthine oxidase and thereby the uric acid (UA) pathway of purine catabolism in macrophages, and pharmacologic targeting of Setdb2 or the UA pathway improved healing. Thus, Setdb2 regulates macrophage plasticity during normal and pathologic wound repair and is a target for therapeutic manipulation.

Indexed as

AgedAnimalsCarrier ProteinsCell DifferentiationCells, CulturedDiabetes Mellitus, Type 2Disease Models, AnimalFemaleHistone-Lysine N-MethyltransferaseHumansMacrophagesMaleMiceMice, Inbred BALB CMice, Inbred C57BLMice, KnockoutCarrier ProteinsHistone-Lysine N-MethyltransferaseNuclear ProteinsSETBP1 protein, humanSetdb2 protein, mouseUric Aciddiabetesepigeneticsgene expression and regulationhistoneinflammationmacrophagesmethylationmonocytes

Identifiers

PMID31350176
PMCPMC6703945
OpenAlexW2962755997

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.