Evidence map›Paper›PMID 31349756›Full record

ArticlemAbs

Site-specific N- and O-glycosylation analysis of atacicept.

Kathrin Stavenhagen, Rabah Gahoual, Elena Dominguez Vega, Angelo Palmese, Agnes L Hipgrave Ederveen, Francesca Cutillo, Wolf Palinsky, Horst Bierau, Manfred Wuhrer

Open access · goldAbstract readVideo-Audio Media
In one paragraph

Article in mAbs. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Review
  6. An etanercept O-glycovariant with enhanced potency.Molecular therapy. Methods & clinical development · 2022
    Article
  7. Towards structure-focused glycoproteomics.Biochemical Society transactions · 2021
    Review
  8. SerumJournal of clinical medicine · 2021
    Article
  9. Article
  10. Optimal Dissociation Methods Differ forJournal of proteome research · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 4 countries.

Kathrin Stavenhagena Division of BioAnalytical Chemistry, VU University Amsterdam , Amsterdam , The Netherlands.ORCID 0000-0001-9322-2945
Rabah Gahouala Division of BioAnalytical Chemistry, VU University Amsterdam , Amsterdam , The Netherlands.ORCID 0000-0001-8459-3138
Elena Dominguez Vegab Center for Proteomics and Metabolomics, Leiden University Medical Center , Leiden , The Netherlands.ORCID 0000-0002-6394-0783
Angelo Palmesed Pharmaceutical & Analytical Development Biotech Products, Merck Serono SpA, an affiliate of Merck KgaA, Darmstadt, Germany , Roma , Italy.
Agnes L Hipgrave Ederveenb Center for Proteomics and Metabolomics, Leiden University Medical Center , Leiden , The Netherlands.
Francesca Cutillod Pharmaceutical & Analytical Development Biotech Products, Merck Serono SpA, an affiliate of Merck KgaA, Darmstadt, Germany , Roma , Italy.ORCID 0000-0001-9498-5493
Wolf Palinskye Biotech Development Programme, Merck Biopharma, an affiliate of Merck KgaA, Darmstadt, Germany , Aubonne , Switzerland.ORCID 0000-0002-2779-7510
Horst Bierauf Biotech Development Programme, CMC Science & Intelligence, Merck Serono SpA, an affiliate of Merck KgaA, Darmstadt, Germany , Rome , Italy.ORCID 0000-0001-8719-6138
Manfred Wuhrera Division of BioAnalytical Chemistry, VU University Amsterdam , Amsterdam , The Netherlands.ORCID 0000-0002-0814-4995
Leiden University Medical Center · NLMSD (Italy) · ITMerck (Germany) · DEMerck Serono (Italy) · ITUniversité Paris Cité · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Fc-fusion protein atacicept is currently under clinical investigation for its biotherapeutic application in autoimmune diseases owing to its ability to bind the two cytokines B-Lymphocyte Stimulator (BLyS) and A PRoliferation-Inducing Ligand (APRIL). Like typical recombinant IgG-based therapeutics, atacicept is a glycoprotein whose glycosylation-related heterogeneity arises from the glycosylation-site localization, site-specific occupation and structural diversity of the attached glycans. Here, we present a first comprehensive site-specific N- and O-glycosylation characterization of atacicept using mass spectrometry-based workflows. First, N- and O-glycosylation sites and their corresponding glycoforms were identified. Second, a relative quantitation of the N-glycosylation site microheterogeneity was achieved by glycopeptide analysis, which was further supported by analysis of the released N-glycans. We confirmed the presence of one N-glycosylation site, carrying 47 glycoforms covering 34 different compositions, next to two hinge region O-glycosylation sites with core 1-type glycans. The relative O-glycan distribution was analyzed based on the de-N-glycosylated intact protein species. Overall, N- and O-glycosylation were consistent between two individual production batches.

Indexed as

Mass SpectrometryGlycosylationPolysaccharidesRecombinant Fusion ProteinsPolysaccharidesRecombinant Fusion ProteinsTACI receptor-IgG Fc fragment fusion proteinataciceptFc-fusion proteinglycosylationN-glycansN-glycopeptidesO-glycopeptides

Identifiers

PMID31349756
PMCPMC6748583
OpenAlexW2965860469

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.