Evidence map›Paper›PMID 31348937›Full record

ArticleJournal of pharmaceutical sciences2020

Framework Mutations of the 10-1074 bnAb Increase Conformational Stability, Manufacturability, and Stability While Preserving Full Neutralization Activity.

Bruce A Kerwin, Chelsey Bennett, Yan Brodsky, Rutilio Clark, J Alaina Floyd, Alison Gillespie, Bryan T Mayer, Megan McClure, Christine Siska, Michael S Seaman and 5 more

Abstract read
In one paragraph

Article in Journal of pharmaceutical sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Review
  11. Review
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Bruce A KerwinJust Biotherapeutics, Inc., Department of Design, 401 Terry Avenue N., Seattle, Washington 98109. Electronic address: bruce.kerwin@just.bio.
Chelsey BennettFred Hutchinson Cancer Research Center, Division of Vaccine and Infectious Disease, 1100 Fairview Avenue N., Seattle, Washington 98109.
Yan BrodskyJust Biotherapeutics, Inc., Department of Design, 401 Terry Avenue N., Seattle, Washington 98109.
Rutilio ClarkJust Biotherapeutics, Inc., Department of Design, 401 Terry Avenue N., Seattle, Washington 98109.
J Alaina FloydJust Biotherapeutics, Inc., Department of Design, 401 Terry Avenue N., Seattle, Washington 98109.
Alison GillespieJust Biotherapeutics, Inc., Department of Design, 401 Terry Avenue N., Seattle, Washington 98109.
Bryan T MayerFred Hutchinson Cancer Research Center, Division of Vaccine and Infectious Disease, 1100 Fairview Avenue N., Seattle, Washington 98109.
Megan McClureJust Biotherapeutics, Inc., Department of Design, 401 Terry Avenue N., Seattle, Washington 98109.
Christine SiskaJust Biotherapeutics, Inc., Department of Design, 401 Terry Avenue N., Seattle, Washington 98109.
Michael S SeamanCenter for Virology and Vaccine Research, Beth Israel Deaconess Medical Center, 3 Blackfan Circle, E/CLS-1001, Boston, Massachusetts 02115.
Kelly E SeatonDepartments of Surgery, Immunology, Molecular Genetics and Microbiology, Duke Human Vaccine Institute, Duke University, Durham, North Carolina 27710.
Jeremy ShaverJust Biotherapeutics, Inc., Department of Design, 401 Terry Avenue N., Seattle, Washington 98109.
Georgia D TomarasDepartments of Surgery, Immunology, Molecular Genetics and Microbiology, Duke Human Vaccine Institute, Duke University, Durham, North Carolina 27710.
Nicole L YatesDepartments of Surgery, Immunology, Molecular Genetics and Microbiology, Duke Human Vaccine Institute, Duke University, Durham, North Carolina 27710.
Randal R KetchemJust Biotherapeutics, Inc., Department of Design, 401 Terry Avenue N., Seattle, Washington 98109.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The broadly neutralizing anti-HIV antibody, 10-1074, is a highly somatically hypermutated IgG1 being developed for prophylaxis in sub-Saharan Africa. A series of algorithms were applied to identify potentially destabilizing residues in the framework of the Fv region. Of 17 residues defined, a variant was identified encompassing 1 light and 3 heavy chain residues, with significantly increased conformational stability while maintaining full neutralization activity. Central to the stabilization was the replacement of the heavy chain residue T108 with R108 at the base of the CDR3 loop which allowed for the formation of a nascent salt bridge with heavy chain residue D137. Three additional mutations were necessary to confer increased conformational stability as evidenced by differential scanning fluorimetry and isothermal chemical unfolding. In addition, we observed increased stability during low pH incubation in which 40% of the parental monomer aggregated while the combinatorial variant showed no increase in aggregation. Incubation of the variant at 100 mg/mL for 6 weeks at 40°C showed a 9-fold decrease in subvisible particles ≥2 μm relative to the parental molecule. Stability-based designs have also translated to improved pharmacokinetics. Together, these data show that increasing conformational stability of the Fab can have profound effects on the manufacturability and long-term stability of a monoclonal antibody.

Indexed as

AnimalsBroadly Neutralizing AntibodiesHEK293 CellsHIV AntibodiesHumansMiceMutationProtein ConformationProtein StabilityProtein Structure, SecondaryBroadly Neutralizing AntibodiesHIV Antibodiesanalytical biochemistryantibody(s)biopharmaceutical characterizationdevelopabilityfluorescence spectroscopyhigh throughput technology(s)HIV/AIDSpharmacokineticsphysical stabilityprotein aggregationprotein foldingprotein structurestabilitystabilization

Identifiers

PMID31348937
PMCPMC6941225

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.