Evidence map›Paper›PMID 31346787›Full record

ArticleMetabolomics : Official journal of the Metabolomic Society2019

Processing of NMR and MS metabolomics data using chemometrics methods: a global tool for fungi biotransformation reactions monitoring.

Cécile Palaric, Serge Pilard, Jean-Xavier Fontaine, Julien Boccard, David Mathiron, Sébastien Rigaud, Dominique Cailleu, François Mesnard, Yoann Gut, Tristan Renaud and 3 more

Abstract read
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In one paragraph

Article in Metabolomics : Official journal of the Metabolomic Society, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Advances in Microbial NMR Metabolomics.Advances in experimental medicine and biology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Cécile PalaricPlateforme-analytique, Institut de Chimie de Picardie FR CNRS 3085, Université de Picardie Jules Verne, 33 rue Saint Leu, 80039, Amiens, France.
Serge PilardPlateforme-analytique, Institut de Chimie de Picardie FR CNRS 3085, Université de Picardie Jules Verne, 33 rue Saint Leu, 80039, Amiens, France. serge.pilard@u-picardie.fr.ORCID 0000-0002-9167-526X
Jean-Xavier FontaineBIOPI EA 3900, Biologie des Plantes et Innovation, Université de Picardie Jules Verne, 1 rue des Louvels, 80000, Amiens, France.
Julien BoccardSchool of Pharmaceutical Sciences, University of Geneva, University of Lausanne, 1211, Geneva 4, Switzerland.
David MathironPlateforme-analytique, Institut de Chimie de Picardie FR CNRS 3085, Université de Picardie Jules Verne, 33 rue Saint Leu, 80039, Amiens, France.
Sébastien RigaudPlateforme-analytique, Institut de Chimie de Picardie FR CNRS 3085, Université de Picardie Jules Verne, 33 rue Saint Leu, 80039, Amiens, France.
Dominique CailleuPlateforme-analytique, Institut de Chimie de Picardie FR CNRS 3085, Université de Picardie Jules Verne, 33 rue Saint Leu, 80039, Amiens, France.
François MesnardBIOPI EA 3900, Biologie des Plantes et Innovation, Université de Picardie Jules Verne, 1 rue des Louvels, 80000, Amiens, France.
Yoann GutTechnologie Servier, 27 rue Eugène Vignat, 45000, Orléans, France.
Tristan RenaudTechnologie Servier, 27 rue Eugène Vignat, 45000, Orléans, France.
Alain PetitTechnologie Servier, 27 rue Eugène Vignat, 45000, Orléans, France.
Jean-Yves BeaumalTechnologie Servier, 27 rue Eugène Vignat, 45000, Orléans, France.
Roland MoliniéBIOPI EA 3900, Biologie des Plantes et Innovation, Université de Picardie Jules Verne, 1 rue des Louvels, 80000, Amiens, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionBiotransformation constitutes an important aspect of the drug discovery process, to mimic human metabolism of active principal ingredient but also to generate new chemical entities. Several microorganisms such as fungi are well adapted to transform drug, whether at the stage of screening or for large-scale production.

objectivesDue to the high chemical complexity of the biotransformation media, it seems attractive to develop new analytical strategies in order to guarantee an adequate monitoring and optimize the production of targeted metabolites or drug candidates.

methodsThe model designed for this purpose concerns the biotransformation of a potential histamine H3 antagonist (S38093) in order to produce phase I metabolites. MS, NMR and chemometrics tools were used to monitor biotransformation reactions.

resultsFirst, a screening of eleven filamentous fungi was carried out by UHPLC-UV-MS and principal component analysis to select the best candidates. Subsequently, MS (t

conclusionThis study demonstrates how NMR and MS acquisitions combined with chemometric methods offer an innovative analytical strategy to have a grasp of functionalization mechanisms, and identify metabolites and other compounds (amino acids, nutrients, etc.) in complex biotransformation mixtures.

Indexed as

MetabolomicsBiotransformationFungiHistamine H3 AntagonistsHumansMagnetic Resonance SpectroscopyMass SpectrometryMolecular StructurePrincipal Component AnalysisHistamine H3 AntagonistsBiotransformationConsensus-OPLS-DAFilamentous fungiNMRUHPLC–UV–MS

Identifiers

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.