Evidence map›Paper›PMID 31346685›Full record

ArticleApplied microbiology and biotechnology2019

The carbonic anhydrase of Clostridium autoethanogenum represents a new subclass of β-carbonic anhydrases.

Bart Pander, Gemma Harris, David J Scott, Klaus Winzer, Michael Köpke, Sean D Simpson, Nigel P Minton, Anne M Henstra

Open access · hybridAbstract read
In one paragraph

Article in Applied microbiology and biotechnology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Comparison of Carbonic Anhydrases for COInternational journal of molecular sciences · 2022
    Article
  4. Article
  5. Activation studies of the β-carbonic anhydrases fromJournal of enzyme inhibition and medicinal chemistry · 2020
    Article
  6. Electrophysiology of the Facultative Autotrophic BacteriumFrontiers in bioengineering and biotechnology · 2020
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Bart PanderClostridia Research Group, BBSRC/EPSRC Synthetic Biology Research Centre, School of Life Sciences, University of Nottingham, Nottingham, NG7 2RD, UK.
Gemma HarrisResearch Complex at Harwell, Rutherford Appleton Laboratory, Harwell Science and Innovation Campus, Didcot, OX11 0FA, UK.
David J ScottResearch Complex at Harwell, Rutherford Appleton Laboratory, Harwell Science and Innovation Campus, Didcot, OX11 0FA, UK.
Klaus WinzerClostridia Research Group, BBSRC/EPSRC Synthetic Biology Research Centre, School of Life Sciences, University of Nottingham, Nottingham, NG7 2RD, UK.
Michael KöpkeLanzaTech Inc., 8045 Lamon Avenue, Suite 400, Skokie, IL, USA.
Sean D SimpsonLanzaTech Inc., 8045 Lamon Avenue, Suite 400, Skokie, IL, USA.
Nigel P MintonClostridia Research Group, BBSRC/EPSRC Synthetic Biology Research Centre, School of Life Sciences, University of Nottingham, Nottingham, NG7 2RD, UK.
Anne M HenstraClostridia Research Group, BBSRC/EPSRC Synthetic Biology Research Centre, School of Life Sciences, University of Nottingham, Nottingham, NG7 2RD, UK. anne.henstra@nottingham.ac.uk.ORCID http://orcid.org/0000-0002-4078-7931
Engineering and Physical Sciences Research Council · GBRutherford Appleton Laboratory · GB

Funding

BBSRC BB/K00283X/1BBSRC BB/L502030/1
6 · The paper itself

Abstract

Carbonic anhydrase catalyses the interconversion of carbon dioxide and water to bicarbonate and protons. It was unknown if the industrial-relevant acetogen Clostridium autoethanogenum possesses these enzymes. We identified two putative carbonic anhydrase genes in its genome, one of the β class and one of the γ class. Carbonic anhydrase activity was found for the purified β class enzyme, but not the γ class candidate. Functional complementation of an Escherichia coli carbonic anhydrase knock-out mutant showed that the β class carbonic anhydrase could complement this activity, but not the γ class candidate gene. Phylogenetic analysis showed that the β class carbonic anhydrase of Clostridium autoethanogenum represents a novel sub-class of β class carbonic anhydrases that form the F-clade. The members of this clade have the shortest primary structure of any known carbonic anhydrase.

Indexed as

Bacterial ProteinsBicarbonatesCarbon DioxideCarbonic AnhydrasesCatalysisClostridiumEscherichia coliGene Knockout TechniquesGenetic Complementation TestKineticsMolecular WeightPhylogenyProtein MultimerizationBacterial ProteinsBicarbonatesCarbon DioxideCarbonic AnhydrasesCarbon dioxideCarbonic anhydraseCarbon monoxideClostridium autoethanogenumEnzyme characterisationGas fermentation

Identifiers

PMID31346685
PMCPMC6690855
OpenAlexW2963919351

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.