Evidence map›Paper›PMID 31346249›Full record

ArticleScientific reports2019

A suite of kinetically superior AEP ligases can cyclise an intrinsically disordered protein.

Karen S Harris, Rosemary F Guarino, Ravindu S Dissanayake, Pedro Quimbar, Owen C McCorkelle, Simon Poon, Quentin Kaas, Thomas Durek, Edward K Gilding, Mark A Jackson and 4 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
3.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 60 citations in OpenAlex.

  1. Article
  2. Metabolite Mediated Protein Macrocyclization.Synlett : accounts and rapid communications in synthetic organic chemistry · 2025
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  18. Review
  19. Protein Macrocyclization for Tertiary Structure Stabilization.Chembiochem : a European journal of chemical biology · 2021
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Karen S HarrisLa Trobe Institute for Molecular Science, Melbourne, Vic., 3086, Australia.
Rosemary F GuarinoLa Trobe Institute for Molecular Science, Melbourne, Vic., 3086, Australia.
Ravindu S DissanayakeLa Trobe Institute for Molecular Science, Melbourne, Vic., 3086, Australia.
Pedro QuimbarLa Trobe Institute for Molecular Science, Melbourne, Vic., 3086, Australia.
Owen C McCorkelleLa Trobe Institute for Molecular Science, Melbourne, Vic., 3086, Australia.
Simon PoonLa Trobe Institute for Molecular Science, Melbourne, Vic., 3086, Australia.
Quentin KaasInstitute for Molecular Bioscience, The University of Queensland, Brisbane, QLD, 4072, Australia.ORCID http://orcid.org/0000-0001-9988-6152
Thomas DurekInstitute for Molecular Bioscience, The University of Queensland, Brisbane, QLD, 4072, Australia.
Edward K GildingInstitute for Molecular Bioscience, The University of Queensland, Brisbane, QLD, 4072, Australia.
Mark A JacksonInstitute for Molecular Bioscience, The University of Queensland, Brisbane, QLD, 4072, Australia.
David J CraikInstitute for Molecular Bioscience, The University of Queensland, Brisbane, QLD, 4072, Australia.ORCID http://orcid.org/0000-0003-0007-6796
Nicole L van der WeerdenLa Trobe Institute for Molecular Science, Melbourne, Vic., 3086, Australia.
Robin F AndersLa Trobe Institute for Molecular Science, Melbourne, Vic., 3086, Australia.
Marilyn A AndersonLa Trobe Institute for Molecular Science, Melbourne, Vic., 3086, Australia. m.anderson@latrobe.edu.au.ORCID http://orcid.org/0000-0002-8257-5128
La Trobe University · AUThe University of Queensland · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Asparaginyl endopeptidases (AEPs) are a class of enzymes commonly associated with proteolysis in the maturation of seed storage proteins. However, a subset of AEPs work preferentially as peptide ligases, coupling release of a leaving group to formation of a new peptide bond. These "ligase-type" AEPs require only short recognition motifs to ligate a range of targets, making them useful tools in peptide and protein engineering for cyclisation of peptides or ligation of separate peptides into larger products. Here we report the recombinant expression, ligase activity and cyclisation kinetics of three new AEPs from the cyclotide producing plant Oldenlandia affinis with superior kinetics to the prototypical recombinant AEP ligase OaAEP1

Indexed as

Antigens, ProtozoanAsparaginyl EndopeptidaseCyclizationCysteine EndopeptidasesIntrinsically Disordered ProteinsLigasesModels, MolecularPlant ProteinsProtein EngineeringProtozoan ProteinsRecombinant ProteinsAntigens, ProtozoanAsparaginyl EndopeptidaseCysteine EndopeptidasesIntrinsically Disordered ProteinsLigasesmerozoite surface protein 2, PlasmodiumPlant ProteinsProtozoan ProteinsRecombinant Proteins

Identifiers

PMID31346249
PMCPMC6658665
OpenAlexW2963311769

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.