Evidence map›Paper›PMID 31346171›Full record

ArticleNature communications2019

Glycine, serine and threonine metabolism confounds efficacy of complement-mediated killing.

Zhi-Xue Cheng, Chang Guo, Zhuang-Gui Chen, Tian-Ci Yang, Jian-Ying Zhang, Jie Wang, Jia-Xin Zhu, Dan Li, Tian-Tuo Zhang, Hui Li and 2 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 102 papers.

0numbers the graph read from it
0cells of the map it votes in
102citing papers in PubMed
16.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

102 citing papers in PubMed, 211 citations in OpenAlex.

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42 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Zhi-Xue ChengCenter for Proteomics and Metabolomics, State Key Laboratory of Bio-Control, School of Life Sciences, Sun Yat-sen University, University City, Guangzhou, 510006, People's Republic of China.
Chang GuoCenter for Proteomics and Metabolomics, State Key Laboratory of Bio-Control, School of Life Sciences, Sun Yat-sen University, University City, Guangzhou, 510006, People's Republic of China.ORCID http://orcid.org/0000-0002-6025-4163
Zhuang-Gui ChenThird Affiliated Hospital of Sun Yat-sen University, Guangzhou, 510630, People's Republic of China.
Tian-Ci YangZhongshan Hospital of Xiamen University, Xiamen, 361004, People's Republic of China.ORCID http://orcid.org/0000-0002-4303-6252
Jian-Ying ZhangHenan Academy of Medical and Pharmaceutical Sciences, Zhengzhou University, Zhengzhou, Henan, 450052, People's Republic of China.
Jie WangCenter for Proteomics and Metabolomics, State Key Laboratory of Bio-Control, School of Life Sciences, Sun Yat-sen University, University City, Guangzhou, 510006, People's Republic of China.
Jia-Xin ZhuThird Affiliated Hospital of Sun Yat-sen University, Guangzhou, 510630, People's Republic of China.
Dan LiCenter for Proteomics and Metabolomics, State Key Laboratory of Bio-Control, School of Life Sciences, Sun Yat-sen University, University City, Guangzhou, 510006, People's Republic of China.
Tian-Tuo ZhangThird Affiliated Hospital of Sun Yat-sen University, Guangzhou, 510630, People's Republic of China. zhtituli@163.com.
Hui LiCenter for Proteomics and Metabolomics, State Key Laboratory of Bio-Control, School of Life Sciences, Sun Yat-sen University, University City, Guangzhou, 510006, People's Republic of China. lihui32@sysu.edu.cn.
Bo PengCenter for Proteomics and Metabolomics, State Key Laboratory of Bio-Control, School of Life Sciences, Sun Yat-sen University, University City, Guangzhou, 510006, People's Republic of China. pengb26@sysu.edu.cn.
Xuan-Xian PengCenter for Proteomics and Metabolomics, State Key Laboratory of Bio-Control, School of Life Sciences, Sun Yat-sen University, University City, Guangzhou, 510006, People's Republic of China. pxuanx@sysu.edu.cn.
Sun Yat-sen University · CNZhengzhou University · CNZhongshan Hospital of Xiamen University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Serum resistance is a poorly understood but common trait of some difficult-to-treat pathogenic strains of bacteria. Here, we report that glycine, serine and threonine catabolic pathway is down-regulated in serum-resistant Escherichia coli, whereas exogenous glycine reverts the serum resistance and effectively potentiates serum to eliminate clinically-relevant bacterial pathogens in vitro and in vivo. We find that exogenous glycine increases the formation of membrane attack complex on bacterial membrane through two previously unrecognized regulations: 1) glycine negatively and positively regulates metabolic flux to purine biosynthesis and Krebs cycle, respectively. 2) α-Ketoglutarate inhibits adenosine triphosphate synthase, which in together promote the formation of cAMP/CRP regulon to increase the expression of complement-binding proteins HtrE, NfrA, and YhcD. The results could lead to effective strategies for managing the infection with serum-resistant bacteria, an especially valuable approach for treating individuals with weak acquired immunity but a normal complement system.

Indexed as

Adenosine TriphosphateBacterial Outer Membrane ProteinsChaperoninsCitric Acid CycleComplement Membrane Attack ComplexComplement System ProteinsEscherichia coliEscherichia coli InfectionsEscherichia coli ProteinsGlycineHumansPurinesSerineSerumThreonineAdenosine TriphosphateBacterial Outer Membrane ProteinsChaperoninsComplement Membrane Attack ComplexComplement System ProteinsEscherichia coli ProteinsGlycinehtrE protein, E coliNfrA protein, E colipurinePurinesSerineThreonine

Identifiers

PMID31346171
PMCPMC6658569
OpenAlexW2963114821

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.