Evidence map›Paper›PMID 31346005›Full record

Observational studyThe European respiratory journal2019

Unmasking the hidden tuberculosis mortality burden in a large

Alberto L Garcia-Basteiro, Juan Carlos Hurtado, Paola Castillo, Fabiola Fernandes, Mireia Navarro, Lucilia Lovane, Isaac Casas, Llorenç Quintó, Dercio Jordao, Mamudo R Ismail and 14 more

Open access · hybridAbstract readObservational Study
In one paragraph

Observational study in The European respiratory journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it, 41 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Performance of Xpert Ultra nasopharyngeal swab for identification of tuberculosis deaths in northern Tanzania.Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases · 2022
    Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Minimally Invasive Tissue Sampling Findings in 12 Patients With Coronavirus Disease 2019.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2021
    Article
  16. Article
  17. Observational
  18. Observational
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

24 authors at 7 institutions in 4 countries.

Alberto L Garcia-BasteiroCentro de Investigação em Saúde de Manhiça (CISM), Maputo, Mozambique.
Juan Carlos HurtadoISGlobal, Hospital Clínic - Universitat de Barcelona, Barcelona, Spain.ORCID 0000-0001-9519-6082
Paola CastilloISGlobal, Hospital Clínic - Universitat de Barcelona, Barcelona, Spain.ORCID 0000-0002-9284-8601
Fabiola FernandesDept of Pathology, Faculty of Medicine/Eduardo Mondlane University and Maputo Central Hospital, Maputo, Mozambique.
Mireia NavarroDept of Microbiology, Hospital Clinic, Universitat de Barcelona, Barcelona, Spain.
Lucilia LovaneDept of Pathology, Faculty of Medicine/Eduardo Mondlane University and Maputo Central Hospital, Maputo, Mozambique.
Isaac CasasDept of Microbiology, Hospital Clinic, Universitat de Barcelona, Barcelona, Spain.
Llorenç QuintóISGlobal, Hospital Clínic - Universitat de Barcelona, Barcelona, Spain.
Dercio JordaoDept of Pathology, Faculty of Medicine/Eduardo Mondlane University and Maputo Central Hospital, Maputo, Mozambique.
Mamudo R IsmailDept of Pathology, Faculty of Medicine/Eduardo Mondlane University and Maputo Central Hospital, Maputo, Mozambique.
Cesaltina LorenzoniDept of Pathology, Faculty of Medicine/Eduardo Mondlane University and Maputo Central Hospital, Maputo, Mozambique.
Carla CarrilhoDept of Pathology, Faculty of Medicine/Eduardo Mondlane University and Maputo Central Hospital, Maputo, Mozambique.
Ariadna SanzISGlobal, Hospital Clínic - Universitat de Barcelona, Barcelona, Spain.ORCID 0000-0001-6648-7438
Natalia RakislovaISGlobal, Hospital Clínic - Universitat de Barcelona, Barcelona, Spain.
Aurea MiraBiomedical Diagnostic Centre (CDB), Hospital Clínic, University of Barcelona, Barcelona, Spain.
Miriam J Alvarez-MartínezISGlobal, Hospital Clínic - Universitat de Barcelona, Barcelona, Spain.
Anélsio CossaCentro de Investigação em Saúde de Manhiça (CISM), Maputo, Mozambique.
Frank CobelensAmsterdam Institute for Global Health and Development, Amsterdam University Medical Centers, Amsterdam, The Netherlands.
Inácio MandomandoCentro de Investigação em Saúde de Manhiça (CISM), Maputo, Mozambique.
Jordi VilaISGlobal, Hospital Clínic - Universitat de Barcelona, Barcelona, Spain.
Quique BassatCentro de Investigação em Saúde de Manhiça (CISM), Maputo, Mozambique.
Clara MenendezCentro de Investigação em Saúde de Manhiça (CISM), Maputo, Mozambique.
Jaume OrdiISGlobal, Hospital Clínic - Universitat de Barcelona, Barcelona, Spain.
Miguel J MartínezISGlobal, Hospital Clínic - Universitat de Barcelona, Barcelona, Spain myoldi@clinic.cat.
Barcelona Institute for Global Health · ESEduardo Mondlane University · MZManhiça Health Research Centre · MZUniversitat de Barcelona · ESAmsterdam Institute for Global Health and Development · NLHospital Clínic de Barcelona · ESInstitució Catalana de Recerca i Estudis Avançats · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sensitive tools are needed to accurately establish the diagnosis of tuberculosis (TB) at death, especially in low-income countries. The objective of this study was to evaluate the burden of TB in a series of patients who died in a tertiary referral hospital in sub-Saharan Africa using an in-house real time PCR (TB-PCR) and the Xpert MTB/RIF Ultra (Xpert Ultra) assay.Complete diagnostic autopsies were performed in a series of 223 deaths (56.5% being HIV-positive), including 54 children, 57 maternal deaths and 112 other adults occurring at the Maputo Central Hospital, Mozambique. TB-PCR was performed in all lung, cerebrospinal fluid and central nervous system samples in HIV-positive patients. All samples positive for TB-PCR or showing histological findings suggestive of TB were analysed with the Xpert Ultra assay.TB was identified as the cause of death in 31 patients: three out of 54 (6%) children, five out of 57 (9%)maternal deaths and 23 out of 112 (21%) other adults. The sensitivity of the main clinical diagnosis to detect TB as the cause of death was 19.4% (95% CI 7.5-37.5) and the specificity was 97.4% (94.0-99.1) compared to autopsy findings. Concomitant TB (TB disease in a patient dying of other causes) was found in 31 additional cases. Xpert Ultra helped to identify 15 cases of concomitant TB. In 18 patients,

Indexed as

AdolescentAdultAutopsyCause of DeathChildChild, PreschoolFemaleHIV InfectionsHumansInfantInfant, NewbornMaleMaternal MortalityMeningitisMozambiqueMycobacterium tuberculosis

Identifiers

PMID31346005
PMCPMC6769353
OpenAlexW2962774168

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.