Evidence map›Paper›PMID 31344821›Full record

ArticleSensors (Basel, Switzerland)2019

Detection of Osmotic Shock-Induced Extracellular Nucleotide Release with a Genetically Encoded Fluorescent Sensor of ADP and ATP.

Keelan J Trull, Piper Miller, Kiet Tat, S Ashley Varney, Jason M Conley, Mathew Tantama

Open access · goldAbstract read
In one paragraph

Article in Sensors (Basel, Switzerland), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Keelan J TrullDepartment of Chemistry, Purdue University, 560 Oval Drive, West Lafayette, IN 47907, USA.ORCID 0000-0002-5411-1510
Piper MillerDepartment of Chemistry, Purdue University, 560 Oval Drive, West Lafayette, IN 47907, USA.
Kiet TatDepartment of Chemistry, Purdue University, 560 Oval Drive, West Lafayette, IN 47907, USA.
S Ashley VarneyDepartment of Chemistry, Purdue University, 560 Oval Drive, West Lafayette, IN 47907, USA.
Jason M ConleyDepartment of Pediatrics, Indiana University School of Medicine, Indianapolis, IN 46202, USA.
Mathew TantamaDepartment of Chemistry, Purdue University, 560 Oval Drive, West Lafayette, IN 47907, USA. mt4@wellesley.edu.ORCID 0000-0002-4072-7680
Purdue University West Lafayette · USIndiana University School of MedicineWellesley College · US

Funding

Genetically-encoded optical sensors to study purinergic signalingR21NS092010 · NINDS · PURDUE UNIVERSITY · PI TANTAMA, MATHEW · 2015 to 2016
$421k
National Institutes of Health R21NS092010NINDS NIH HHS R21 NS092010
6 · The paper itself

Abstract

Purinergic signals, such as extracellular adenosine triphosphate (ATP) and adenosine diphosphate (ADP), mediate intercellular communication and stress responses throughout mammalian tissues, but the dynamics of their release and clearance are still not well understood. Although physiochemical methods provide important insight into physiology, genetically encoded optical sensors have proven particularly powerful in the quantification of signaling in live specimens. Indeed, genetically encoded luminescent and fluorescent sensors provide new insights into ATP-mediated purinergic signaling. However, new tools to detect extracellular ADP are still required. To this end, in this study, we use protein engineering to generate a new genetically encoded sensor that employs a high-affinity bacterial ADP-binding protein and reports a change in occupancy with a change in the Förster-type resonance energy transfer (FRET) between cyan and yellow fluorescent proteins. We characterize the sensor in both protein solution studies, as well as live-cell microscopy. This new sensor responds to nanomolar and micromolar concentrations of ADP and ATP in solution, respectively, and in principle it is the first fully-genetically encoded sensor with sufficiently high affinity for ADP to detect low levels of extracellular ADP. Furthermore, we demonstrate that tethering the sensor to the cell surface enables the detection of physiologically relevant nucleotide release induced by hypoosmotic shock as a model of tissue edema. Thus, we provide a new tool to study purinergic signaling that can be used across genetically tractable model systems.

Indexed as

Biosensing TechniquesAdenosine DiphosphateAdenosine TriphosphateCell CommunicationEdemaFluorescence Resonance Energy TransferFluorescent DyesHumansLuminescent ProteinsOsmotic PressureProtein BindingAdenosine DiphosphateAdenosine TriphosphateFluorescent DyesLuminescent Proteinsextracellular ADPfluorescent sensorFRETgenetically encodedpurinergic signaling

Identifiers

PMID31344821
PMCPMC6695626
OpenAlexW2963409124

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.