Evidence map›Paper›PMID 31341223›Full record

ArticleScientific reports2019

Comparative Genomics Analysis in Grass Species Reveals Two Distinct Evolutionary Strategies Adopted by R Genes.

Yinan Zhang, Meijun Guo, Jie Shen, Xie Song, Shuqi Dong, Yinyuan Wen, Xiangyang Yuan, Pingyi Guo

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.9field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. DeepFrontiers in plant science · 2024
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Yinan ZhangAgronomy College, Shanxi Agricultural University, Taigu, 030801, China.
Meijun GuoAgronomy College, Shanxi Agricultural University, Taigu, 030801, China.
Jie ShenAgronomy College, Shanxi Agricultural University, Taigu, 030801, China.
Xie SongAgronomy College, Shanxi Agricultural University, Taigu, 030801, China.
Shuqi DongAgronomy College, Shanxi Agricultural University, Taigu, 030801, China.
Yinyuan WenAgronomy College, Shanxi Agricultural University, Taigu, 030801, China.
Xiangyang YuanAgronomy College, Shanxi Agricultural University, Taigu, 030801, China.
Pingyi GuoAgronomy College, Shanxi Agricultural University, Taigu, 030801, China. pyguo126@126.com.
Shanxi Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Resistance genes play an important role in the defense of plants against the invasion of pathogens. In Setaria italica and closely related grass species, R genes have been identified through genetic mapping and genome-wide homologous/domain searching. However, there has been to date no systematic analysis of the evolutionary features of R genes across all sequenced grass genomes. Here, we determined and comprehensively compared R genes in all 12 assembled grass genomes and an outgroup species (Arabidopsis thaliana) through synteny and selection analyses of multiple genomes. We found that the two groups of nucleotide binding site (NBS) domains containing R genes-R tandem duplications (TD) and R singletons-adopted different strategies and showed different features in their evolution. Based on K

Indexed as

ArabidopsisBrachypodiumEvolution, MolecularGenes, PlantGenes, vprGenomicsMusaOryzaPanicumPhylogenyPoaceaeSetaria PlantSorghumSyntenyTriticumZea mays

Identifiers

PMID31341223
PMCPMC6656885
OpenAlexW2963057324

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.