Evidence map›Paper›PMID 31341187›Full record

ArticleScientific reports2019

TAF1, associated with intellectual disability in humans, is essential for embryogenesis and regulates neurodevelopmental processes in zebrafish.

Sanna Gudmundsson, Maria Wilbe, Beata Filipek-Górniok, Anna-Maja Molin, Sara Ekvall, Josefin Johansson, Amin Allalou, Hans Gylje, Vera M Kalscheuer, Johan Ledin and 2 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. A recently evolved TAF8 isoform arising from anbioRxiv : the preprint server for biology · 2026
    Article
  3. Alterations in energy production in aFrontiers in aging neuroscience · 2026
    Article
  4. Unraveling the impact ofBrain communications · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. The roles of TAF1 in neuroscience and beyond.Royal Society open science · 2024
    Review
  10. ZNF91 is an endogenous repressor of the molecular phenotype associated with X-linked dystonia-parkinsonism (XDP).Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Sanna GudmundssonDepartment of Immunology, Genetics and Pathology, Uppsala University, Science for Life Laboratory, Uppsala, 751 08, Sweden. sanna.gudmundsson@igp.uu.se.ORCID http://orcid.org/0000-0002-2332-074X
Maria WilbeDepartment of Immunology, Genetics and Pathology, Uppsala University, Science for Life Laboratory, Uppsala, 751 08, Sweden.
Beata Filipek-GórniokDepartment of Organismal Biology, Genome Engineering Zebrafish, Science for Life Laboratory, Uppsala University, Uppsala, 752 36, Sweden.
Anna-Maja MolinDepartment of Immunology, Genetics and Pathology, Uppsala University, Science for Life Laboratory, Uppsala, 751 08, Sweden.
Sara EkvallDepartment of Immunology, Genetics and Pathology, Uppsala University, Science for Life Laboratory, Uppsala, 751 08, Sweden.
Josefin JohanssonDepartment of Immunology, Genetics and Pathology, Uppsala University, Science for Life Laboratory, Uppsala, 751 08, Sweden.ORCID http://orcid.org/0000-0002-5152-4096
Amin AllalouDepartment of Information Technology, Uppsala University, Sweden and Science for Life Laboratory, Uppsala, 751 05, Sweden.
Hans GyljeDepartment of Paediatrics, Central Hospital, Västerås, 721 89, Sweden.
Vera M KalscheuerResearch Group Development and Disease, Max Planck Institute for Molecular Genetics, Berlin, 141 95, Germany.ORCID http://orcid.org/0000-0001-6898-3259
Johan LedinDepartment of Organismal Biology, Genome Engineering Zebrafish, Science for Life Laboratory, Uppsala University, Uppsala, 752 36, Sweden.
Göran AnnerénDepartment of Immunology, Genetics and Pathology, Uppsala University, Science for Life Laboratory, Uppsala, 751 08, Sweden. goran.anneren@igp.uu.se.
Marie-Louise BondesonDepartment of Immunology, Genetics and Pathology, Uppsala University, Science for Life Laboratory, Uppsala, 751 08, Sweden. marielouise.bondeson@igp.uu.se.
Uppsala University · SEMax Planck Institute for Molecular Genetics · DEVästerås Municipality · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The TATA-box binding protein associated factor 1 (TAF1) protein is a key unit of the transcription factor II D complex that serves a vital function during transcription initiation. Variants of TAF1 have been associated with neurodevelopmental disorders, but TAF1's molecular functions remain elusive. In this study, we present a five-generation family affected with X-linked intellectual disability that co-segregated with a TAF1 c.3568C>T, p.(Arg1190Cys) variant. All affected males presented with intellectual disability and dysmorphic features, while heterozygous females were asymptomatic and had completely skewed X-chromosome inactivation. We investigated the role of TAF1 and its association to neurodevelopment by creating the first complete knockout model of the TAF1 orthologue in zebrafish. A crucial function of human TAF1 during embryogenesis can be inferred from the model, demonstrating that intact taf1 is essential for embryonic development. Transcriptome analysis of taf1 zebrafish knockout revealed enrichment for genes associated with neurodevelopmental processes. In conclusion, we propose that functional TAF1 is essential for embryonic development and specifically neurodevelopmental processes.

Indexed as

AdolescentAdultAnimalsChildChild, PreschoolFemaleGene Expression ProfilingGene Knockdown TechniquesHistone AcetyltransferasesHumansIntellectual DisabilityMaleNervous SystemPedigreeTATA-Binding Protein Associated FactorsTranscription Factor TFIIDHistone Acetyltransferasestaf1 protein, zebrafishTATA-binding protein associated factor 250 kDaTATA-Binding Protein Associated FactorsTranscription Factor TFIIDZebrafish Proteins

Identifiers

PMID31341187
PMCPMC6656882
OpenAlexW2963173255

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.