Evidence map›Paper›PMID 31341022›Full record

ArticleThe Journal of biological chemistry2019

Structural basis of the atypical activation mechanism of KRAS

Asim K Bera, Jia Lu, Thomas E Wales, Sudershan Gondi, Deepak Gurbani, Andrew Nelson, John R Engen, Kenneth D Westover

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 33 citations in OpenAlex.

  1. Observational
  2. Review
  3. Article
  4. Article
  5. Decrypting Allostery in Membrane-Bound K-Ras4B Using ComplementaryJournal of the American Chemical Society · 2024
    Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Anticancer drug resistance: An update and perspective.Drug resistance updates : reviews and commentaries in antimicrobial and anticancer chemotherapy · 2021
    Review
  14. Review
  15. Drugging multiple same-allele driver mutations in cancer.Expert opinion on drug discovery · 2021
    Article
  16. The to and fro of Rho.Structure (London, England : 1993) · 2021
    Article
  17. Article
  18. Article
  19. Article
  20. The current understanding of KRAS protein structure and dynamics.Computational and structural biotechnology journal · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Asim K BeraDepartments of Biochemistry and Radiation Oncology, The University of Texas Southwestern Medical Center at Dallas, Dallas, Texas 75390.
Jia LuDepartments of Biochemistry and Radiation Oncology, The University of Texas Southwestern Medical Center at Dallas, Dallas, Texas 75390.
Thomas E WalesDepartment of Chemistry and Chemical Biology, Northeastern University, Boston, Masachusetts 02115.
Sudershan GondiDepartments of Biochemistry and Radiation Oncology, The University of Texas Southwestern Medical Center at Dallas, Dallas, Texas 75390.
Deepak GurbaniDepartments of Biochemistry and Radiation Oncology, The University of Texas Southwestern Medical Center at Dallas, Dallas, Texas 75390.
Andrew NelsonDepartments of Biochemistry and Radiation Oncology, The University of Texas Southwestern Medical Center at Dallas, Dallas, Texas 75390.ORCID 0000-0002-1413-3766
John R EngenDepartment of Chemistry and Chemical Biology, Northeastern University, Boston, Masachusetts 02115.ORCID 0000-0002-6918-9476
Kenneth D WestoverDepartments of Biochemistry and Radiation Oncology, The University of Texas Southwestern Medical Center at Dallas, Dallas, Texas 75390 Kenneth.Westover@UTSouthwestern.edu.ORCID 0000-0003-3653-5923
The University of Texas Southwestern Medical Center · USNortheastern University · USSouthwestern Medical Center · US

Funding

Project 4: Secondary Cancers Among NF1 Cancer SurvivorsU54CA196519 · NCI · INDIANA UNIVERSITY INDIANAPOLIS · PI Yunlong Liu · 2015 to 2026
$26.9M
NCI NIH HHS U54 CA196519
6 · The paper itself

Abstract

RAS regulation and signaling are largely accomplished by direct protein-protein interactions, making RAS protein dynamics a critical determinant of RAS function. Here, we report a crystal structure of GDP-bound KRAS

Indexed as

Binding SitesCrystallography, X-RayEnzyme ActivationGTP PhosphohydrolasesGuanine Nucleotide Exchange FactorsHumansKineticsModels, MolecularNoonan SyndromeNucleotidesPolymorphism, Single NucleotideProtein ConformationProto-Oncogene Proteins p21(ras)ras Guanine Nucleotide Exchange Factorsras ProteinsSignal TransductionGTP PhosphohydrolasesGuanine Nucleotide Exchange FactorsKRAS protein, humanNucleotidesProto-Oncogene Proteins p21(ras)ras Guanine Nucleotide Exchange Factorsras ProteinsGTPaseGTPase Kras (KRAS)guanine nucleotide-exchange factor (GEF)Noonan syndromenucleotide exchangeRASRASopathyRas proteinX-ray crystallography

Identifiers

PMID31341022
PMCPMC6755796
OpenAlexW2963059612

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.