ArticleInternational journal of molecular sciences2019
Evolutionary and Comparative Expression Analyses of TCP Transcription Factor Gene Family in Land Plants.
Article in International journal of molecular sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.
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40 citing papers in PubMed, 80 citations in OpenAlex.
- Genome-Wide Characterization of TCP Transcription Factors in Common Glasswort (International journal of molecular sciences · 2026Article
- Cis-regulatory editing of SD1 promoter enhances TCP19-mediated repression to optimize plant height in Kam sweet rice.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- TCP21 negatively regulates photomorphogenesis by integrating phyB- and HY5-mediated signaling pathways in Arabidopsis.The Plant journal : for cell and molecular biology · 2026Article
- Genome-Wide Identification of thePlants (Basel, Switzerland) · 2026Article
- Genome-wide identification and expression analysis of thePhysiology and molecular biology of plants : an international journal of functional plant biology · 2025Article
- Article
- Evolution and comparison of the expression of TCP genes in the benincaseae and cucurbiteae tribes.Scientific reports · 2025Article
- Genome-wide identification and functional analyses of the TCP gene family in Carthamus tinctorius L.Scientific reports · 2025Article
- Genome-wide identification and analysis of phosphate utilization related genes (PURs) reveal their roles involved in low phosphate responses in Brassica napus L.BMC plant biology · 2025Article
- Identification and expression responses of TCP gene family inFrontiers in plant science · 2025Article
- Comprehensive Analysis of theInternational journal of molecular sciences · 2024Article
- Evolution and Functional Dynamics of TCP Transcription Factor Gene Family in Passion Fruit (Plants (Basel, Switzerland) · 2024Article
- Identification and characterization of the RcTCP gene family and its expression in response to abiotic stresses in castor bean.BMC genomics · 2024Article
- Genome-wide analysis and expression profile of3 Biotech · 2024Article
- Genome-Wide Analysis of thePlants (Basel, Switzerland) · 2024Article
- Genome-wide molecular evolution analysis of the GRF and GIF gene families in Plantae (Archaeplastida).BMC genomics · 2024Article
- Genome-wide identification and integrated analysis of TCP genes controlling ginsenoside biosynthesis in Panax ginseng.BMC plant biology · 2024Article
- Transcriptome-Wide Identification of TCP Transcription Factor Family Members inInternational journal of molecular sciences · 2023Article
- Genome-Wide Identification of TCP Gene Family inInternational journal of molecular sciences · 2023Article
- Genome-wide transcriptional profiling provides clues to molecular mechanisms underlying cold tolerance in chickpea.Scientific reports · 2023Article
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Authors and funding
10 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The plant-specific Teosinte-branched 1/Cycloidea/Proliferating (TCP) transcription factor genes are involved in plants' development, hormonal pathways, and stress response but their evolutionary history is uncertain. The genome-wide analysis performed here for 47 plant species revealed 535 TCP candidates in terrestrial plants and none in aquatic plants, and that TCP family genes originated early in the history of land plants. Phylogenetic analysis divided the candidate genes into Classes I and II, and Class II was further divided into CYCLOIDEA (CYC) and CINCINNATA (CIN) clades; CYC is more recent and originated from CIN in angiosperms. Protein architecture, intron pattern, and sequence characteristics were conserved in each class or clade supporting this classification. The two classes significantly expanded through whole-genome duplication during evolution. Expression analysis revealed the conserved expression of TCP genes from lower to higher plants. The expression patterns of Class I and CIN genes in different stages of the same tissue revealed their function in plant development and their opposite effects in the same biological process. Interaction network analysis showed that TCP proteins tend to form protein complexes, and their interaction networks were conserved during evolution. These results contribute to further functional studies on TCP family genes.
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