Evidence map›Paper›PMID 31338995›Full record

Trial reportMolecular genetics & genomic medicine2019

DNA hypermethylation of GDF5 in developmental dysplasia of the hip (DDH).

Taghi Baghdadi, Mohammad Nejadhosseinian, Reza Shirkoohi, Reza Mostafavi Tabatabaee, Seyed S Tamehri, Mojtaba Saffari, S M Javad Mortazavi

Open access · goldAbstract readClinical Trial
In one paragraph

Trial report in Molecular genetics & genomic medicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it, 26 citations in OpenAlex.

  1. Pooled it
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  7. Article
  8. Regulatory Mechanisms ofInternational journal of molecular sciences · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Taghi BaghdadiDepartment of Orthopedic Surgery, Tehran University of Medical Sciences, Tehran, IR Iran.
Mohammad NejadhosseinianDepartment of Orthopedic Surgery, Tehran University of Medical Sciences, Tehran, IR Iran.
Reza ShirkoohiDepartment of Medical Genetics, Tehran University of Medical Sciences, Tehran, IR Iran.
Reza Mostafavi TabatabaeeJoint Reconstruction Research Center, Imam Khomeini Hospital, Tehran University of Medical Sciences, Tehran, IR Iran.
Seyed S TamehriJoint Reconstruction Research Center, Imam Khomeini Hospital, Tehran University of Medical Sciences, Tehran, IR Iran.
Mojtaba SaffariDepartment of medical genetics, School of medicine, Tehran University of Medical Sciences, Tehran, IR Iran.
S M Javad MortazaviDepartment of Orthopedic Surgery, Tehran University of Medical Sciences, Tehran, IR Iran.ORCID 0000-0003-4189-7777
Imam Khomeini Hospital · IRTehran University of Medical Sciences · IR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

INTRODUCTION &

objectiveDevelopmental Dysplasia of the Hip (DDH) is one of the most common congenital skeletal anomalies. Body of evidence suggests that genetic variations in GDF5 are associated with susceptibility to DDH. DDH is a multifactorial disease and its etiology has not been entirely determined. Epigenetic changes such as DNA methylation could be linked to DDH. In this scheme, we hypothesized that changes in GDF5 DNA methylation could predispose a susceptible individual to DDH.

methodsThis study consisted of 45 DDH patients and 45 controls with healthy femoral neck cartilage, who underwent hemi-, or total arthroplasty for the femoral neck fracture. A cartilage sample of 1 cm in diameter and 1 mm in the thickness was obtained for DNA extraction. DNA was extracted and DNA methylation of GDF5 was evaluated by metabisulfite method.

resultsMethylation analysis showed that the promoter of GDF5 in cartilage samples from DDH patients was hypermethylated in comparison to healthy controls (p = .001).

conclusionOur study showed that the methylation status of the GDF5 in patients with DDH is dysregulated. This dysregulation indicates that adjustment in the methylation might modify the expression of this gene. Since this gene plays an essential role in cartilage and bone development, thus reducing its expression can contribute to the pathogenesis of DDH. Further studies are needed to elucidate the role of GDF5 in this disease.

Indexed as

DNA MethylationEpigenesis, GeneticPromoter Regions, GeneticAdultCartilageFemaleGrowth Differentiation Factor 5Hip DislocationHumansMaleMiddle AgedGDF5 protein, humanGrowth Differentiation Factor 5Developmental Dysplasia of the Hip (DDH)DNA methylationGDF5

Identifiers

PMID31338995
PMCPMC6732267
OpenAlexW2963280464

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.