Evidence map›Paper›PMID 31338646›Full record

ArticleChromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology2019

A database of amphibian karyotypes.

Riddhi D Perkins, Julio Rincones Gamboa, Michelle M Jonika, Johnathan Lo, Amy Shum, Richard H Adams, Heath Blackmon

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Article in Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Article
  3. Comparative cytogenetics of theComparative cytogenetics · 2025
    Article
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  8. Transposable element and host silencing activity in gigantic genomes.Frontiers in cell and developmental biology · 2023
    Article
  9. Why not Y naught.Heredity · 2022
    Review
  10. Article
  11. Diptera andFrontiers in ecology and evolution · 2022
    Article
  12. Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Riddhi D PerkinsDepartment of Biology, TAMU 3258 Texas A&M, College Station, TX, 77843, USA.
Julio Rincones GamboaDepartment of Biology, TAMU 3258 Texas A&M, College Station, TX, 77843, USA.
Michelle M JonikaDepartment of Biology, TAMU 3258 Texas A&M, College Station, TX, 77843, USA.
Johnathan LoDepartment of Biology, TAMU 3258 Texas A&M, College Station, TX, 77843, USA.
Amy ShumDepartment of Biology, TAMU 3258 Texas A&M, College Station, TX, 77843, USA.
Richard H AdamsDepartment of Biology, University of Texas at Arlington, 501 S. Nedderman Dr, Arlington, TX, 76019, USA.
Heath BlackmonDepartment of Biology, TAMU 3258 Texas A&M, College Station, TX, 77843, USA. coleoguy@gmail.com.ORCID http://orcid.org/0000-0002-5433-4036

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

One of the first characteristics that we learn about the genome of many species is the number of chromosomes it is divided among. Despite this, many questions regarding the evolution of chromosome number remain unanswered. Testing hypotheses of chromosome number evolution using comparative approaches requires trait data to be readily accessible and associated with currently accepted taxonomy. The lack of accessible karyotype data that can be linked to phylogenies has limited the application of comparative approaches that could help us understand the evolution of genome structure. Furthermore, for taxonomists, the significance of new karyotype data can only be determined with reference to records for other species. Here, we describe a curated database (karyotype.org) developed to facilitate access to chromosome number and sex chromosome system data for amphibians. The open web interface for this database allows users to generate customized exploratory plots and tables of selected clades, as well as downloading CSV files for offline analyses.

Indexed as

ChromosomesDatabases, GeneticKaryotypeAmphibiansAnimalsFemaleGenomicsMaleSex ChromosomesAmphibianChromosome numberCytogeneticCytotaxonomySex chromosome

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.