Evidence map›Paper›PMID 31337756›Full record

ArticleNature communications2019

Mitochondrially-targeted APOBEC1 is a potent mtDNA mutator affecting mitochondrial function and organismal fitness in Drosophila.

Simonetta Andreazza, Colby L Samstag, Alvaro Sanchez-Martinez, Erika Fernandez-Vizarra, Aurora Gomez-Duran, Juliette J Lee, Roberta Tufi, Michael J Hipp, Elizabeth K Schmidt, Thomas J Nicholls and 6 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 53 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 2 institutions in 2 countries.

Simonetta AndreazzaMRC Mitochondrial Biology Unit, University of Cambridge, Cambridge Biomedical Campus, Hills Road, Cambridge, CB2 0XY, UK.ORCID http://orcid.org/0000-0001-8816-4955
Colby L SamstagDepartment of Genome Sciences, University of Washington, Seattle, WA, 98195, USA.ORCID http://orcid.org/0000-0002-5491-7725
Alvaro Sanchez-MartinezMRC Mitochondrial Biology Unit, University of Cambridge, Cambridge Biomedical Campus, Hills Road, Cambridge, CB2 0XY, UK.ORCID http://orcid.org/0000-0002-2728-6251
Erika Fernandez-VizarraMRC Mitochondrial Biology Unit, University of Cambridge, Cambridge Biomedical Campus, Hills Road, Cambridge, CB2 0XY, UK.ORCID http://orcid.org/0000-0002-2469-142X
Aurora Gomez-DuranMRC Mitochondrial Biology Unit, University of Cambridge, Cambridge Biomedical Campus, Hills Road, Cambridge, CB2 0XY, UK.ORCID http://orcid.org/0000-0002-5895-6860
Juliette J LeeMRC Mitochondrial Biology Unit, University of Cambridge, Cambridge Biomedical Campus, Hills Road, Cambridge, CB2 0XY, UK.
Roberta TufiMRC Mitochondrial Biology Unit, University of Cambridge, Cambridge Biomedical Campus, Hills Road, Cambridge, CB2 0XY, UK.ORCID http://orcid.org/0000-0001-7295-010X
Michael J HippDepartment of Pathology, University of Washington, Seattle, WA, 98195, USA.
Elizabeth K SchmidtDepartment of Pathology, University of Washington, Seattle, WA, 98195, USA.
Thomas J NichollsMRC Mitochondrial Biology Unit, University of Cambridge, Cambridge Biomedical Campus, Hills Road, Cambridge, CB2 0XY, UK.
Payam A GammageMRC Mitochondrial Biology Unit, University of Cambridge, Cambridge Biomedical Campus, Hills Road, Cambridge, CB2 0XY, UK.ORCID http://orcid.org/0000-0003-1968-1726
Patrick F ChinneryMRC Mitochondrial Biology Unit, University of Cambridge, Cambridge Biomedical Campus, Hills Road, Cambridge, CB2 0XY, UK.
Michal MinczukMRC Mitochondrial Biology Unit, University of Cambridge, Cambridge Biomedical Campus, Hills Road, Cambridge, CB2 0XY, UK.ORCID http://orcid.org/0000-0001-8242-1420
Leo J PallanckDepartment of Genome Sciences, University of Washington, Seattle, WA, 98195, USA.
Scott R KennedyDepartment of Pathology, University of Washington, Seattle, WA, 98195, USA.ORCID http://orcid.org/0000-0002-4444-1145
Alexander J WhitworthMRC Mitochondrial Biology Unit, University of Cambridge, Cambridge Biomedical Campus, Hills Road, Cambridge, CB2 0XY, UK. a.whitworth@mrc-mbu.cam.ac.uk.ORCID http://orcid.org/0000-0002-1154-6629
University of Cambridge · GBUniversity of Washington · US

Funding

GENETIC APPROACHES TO AGING RESEARCHT32AG000057 · NIA · UNIVERSITY OF WASHINGTON · PI RABINOVITCH, PETER S · 1985 to 2019
$14.2M
Resource Component: Acquisition, maintenance and distribution of Drosophila stocksP40OD018537 · OD · TRUSTEES OF INDIANA UNIVERSITY · PI Annette L. Parks · 2014 to 2026
$13.5M
Mechanisms of somatic mtDNA mutation detection and eliminationR21NS090073 · NINDS · UNIVERSITY OF WASHINGTON · PI PALLANCK, LEO J · 2014 to 2015
$425k
Medical Research Council G0601943Medical Research Council MC_UP_1501/1Medical Research Council MC_UU_00015/4Medical Research Council MC_UU_00015/6Medical Research Council MC_UU_00015/7NIA NIH HHS T32 AG000057NIH HHS P40 OD018537NINDS NIH HHS R21 NS090073Wellcome Trust
6 · The paper itself

Abstract

Somatic mutations in the mitochondrial genome (mtDNA) have been linked to multiple disease conditions and to ageing itself. In Drosophila, knock-in of a proofreading deficient mtDNA polymerase (POLG) generates high levels of somatic point mutations and also small indels, but surprisingly limited impact on organismal longevity or fitness. Here we describe a new mtDNA mutator model based on a mitochondrially-targeted cytidine deaminase, APOBEC1. mito-APOBEC1 acts as a potent mutagen which exclusively induces C:G>T:A transitions with no indels or mtDNA depletion. In these flies, the presence of multiple non-synonymous substitutions, even at modest heteroplasmy, disrupts mitochondrial function and dramatically impacts organismal fitness. A detailed analysis of the mutation profile in the POLG and mito-APOBEC1 models reveals that mutation type (quality) rather than quantity is a critical factor in impacting organismal fitness. The specificity for transition mutations and the severe phenotypes make mito-APOBEC1 an excellent mtDNA mutator model for ageing research.

Indexed as

AnimalsAPOBEC-1 DeaminaseDNA, MitochondrialDrosophilaMitochondriaModels, GeneticMutationOrganisms, Genetically ModifiedAPOBEC-1 DeaminaseDNA, Mitochondrial

Identifiers

PMID31337756
PMCPMC6650417
OpenAlexW2963003804

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.