Evidence map›Paper›PMID 31337343›Full record

ArticleBMC plant biology2019

Flower bud proteome reveals modulation of sex-biased proteins potentially associated with sex expression and modification in dioecious Coccinia grandis.

Ravi Suresh Devani, Tejas Chirmade, Sangram Sinha, Abdelhafid Bendahmane, Bhushan B Dholakia, Anjan Kumar Banerjee, Jayeeta Banerjee

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

  1. Developmental and Molecular Insights into AgNOPlants (Basel, Switzerland) · 2026
    Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Ravi Suresh DevaniBiology Division, Indian Institute of Science Education and Research (IISER), Pune, 411008, India.
Tejas ChirmadeBiochemical Science Division National Chemical laboratory (CSIR-NCL), Pune, 411008, India.
Sangram SinhaDepartment of Botany, Tripura University, Suryamaninagar, Tripura, 799022, India.
Abdelhafid BendahmaneIPS2, INRA, CNRS, University Paris Sud, University of Evry, University of Paris Diderot, University of Paris Saclay, Batiment 630, 91405, Orsay, France.
Bhushan B DholakiaBiology Division, Indian Institute of Science Education and Research (IISER), Pune, 411008, India.
Anjan Kumar BanerjeeBiology Division, Indian Institute of Science Education and Research (IISER), Pune, 411008, India. akb@iiserpune.ac.in.
Jayeeta BanerjeeBiology Division, Indian Institute of Science Education and Research (IISER), Pune, 411008, India. jayeetab@iiserpune.ac.in.ORCID http://orcid.org/0000-0002-8338-389X
Indian Institute of Science Education and Research Pune · INCentre National de la Recherche Scientifique · FRNational Chemical Laboratory · INTripura University · IN

Funding

Department of Science and Technology, Government of India SR/WOS-A/LS-1233/2014
6 · The paper itself

Abstract

backgroundDioecy is an important sexual system wherein, male and female flowers are borne on separate unisexual plants. Knowledge of sex-related differences can enhance our understanding in molecular and developmental processes leading to unisexual flower development. Coccinia grandis is a dioecious species belonging to Cucurbitaceae, a family well-known for diverse sexual forms. Male and female plants have 22A + XY and 22A + XX chromosomes, respectively. Previously, we have reported a gynomonoecious form (22A + XX) of C. grandis bearing morphologically hermaphrodite flowers (GyM-H) and female flowers (GyM-F). Also, we have showed that foliar spray of AgNO

resultsTo identify sex-related differences, total proteomes from male, female, GyM-H and Ag-H flower buds at early and middle stages of development were analysed by label-free proteomics. Protein search against the cucumber protein sequences (Phytozome) as well as in silico translated C. grandis flower bud transcriptome database, resulted in the identification of 2426 and 3385 proteins (FDR ≤ 1%), respectively. The latter database was chosen for further analysis as it led to the detection of higher number of proteins. Identified proteins were annotated using BLAST2GO pipeline. SWATH-MS-based comparative abundance analysis between Female_Early_vs_Male_Early, Ag_Early_vs_Female_Early, GyM-H_Middle_vs_Male_Middle and Ag_Middle_vs_ Male_Middle led to the identification of 650, 1108, 905 and 805 differentially expressed proteins, respectively, at fold change ≥1.5 and P ≤ 0.05. Ethylene biosynthesis-related candidates as highlighted in protein interaction network were upregulated in female buds compared to male buds. AgNO

conclusionOverall, current proteomic analysis provides insights in the identification of key proteins governing dioecy and unisexual flower development in cucurbitaceae, the second largest horticultural family in terms of economic importance. Also, our results suggest that the ethylene-mediated stamen inhibition might be conserved in dioecious C. grandis similar to its monoecious cucurbit relatives. Further, male-biased proteins associated with pollen germination and tube growth identified here can help in understanding pollen fertility.

Indexed as

Sex DifferentiationChromosomes, PlantCucurbitaceaeFlowersGene Expression Regulation, PlantPlant ProteinsProteomePlant ProteinsProteomeCoccinia grandisDioecyPollen fertilityProteomicsSex modificationStamen arrest

Identifiers

PMID31337343
PMCPMC6651928
OpenAlexW2963195082

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.