Evidence map›Paper›PMID 31337340›Full record

ArticleBMC genomics2019

Genome-wide localization of the polyphenol quercetin in human monocytes.

Dana Atrahimovich, Avraham O Samson, Yifthah Barsheshet, Jacob Vaya, Soliman Khatib, Eli Reuveni

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Dana AtrahimovichDepartment of Oxidative Stress and Human Diseases, MIGAL - Galilee Research Institute, 11016, Kiryat Shmona, Israel.
Avraham O SamsonFaculty of Medicine in the Galilee, Bar-Ilan University, 1311502, Safed, Israel.
Yifthah BarsheshetFaculty of Medicine in the Galilee, Bar-Ilan University, 1311502, Safed, Israel.
Jacob VayaDepartment of Oxidative Stress and Human Diseases, MIGAL - Galilee Research Institute, 11016, Kiryat Shmona, Israel.
Soliman KhatibDepartment of Oxidative Stress and Human Diseases, MIGAL - Galilee Research Institute, 11016, Kiryat Shmona, Israel.
Eli ReuveniFaculty of Medicine in the Galilee, Bar-Ilan University, 1311502, Safed, Israel. reuvenieli@gmail.com.
Bar-Ilan University · ILTel Hai Academic College · ILMigal - Galilee Technology Center · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundQuercetin is a polyphenol of great interest given its antioxidant activity and involvement in the immune response. Although quercetin has been well studied at the molecular level as a gene regulator and an activator of specific cellular pathways, not much attention has been given to its mechanism of action at the genome-wide level. The present study aims to characterize quercetin's interaction with cellular DNA and to show its subsequent effect on downstream transcription.

resultsTwo massive parallel DNA-sequencing technologies were used: Chem-seq and RNA-seq. We demonstrate that upon binding to DNA or genome-associated proteins, quercetin acts as a cis-regulatory transcription factor for the expression of genes that are involved in the cell cycle, differentiation and development.

conclusionsSuch findings could provide new and important insights into the mechanisms by which the dietary polyphenol quercetin influences cellular functions.

Indexed as

Cell Cycle ProteinsCell DifferentiationDNAGene Expression RegulationHigh-Throughput Nucleotide SequencingHumansMonocytesQuercetinTranscription FactorsCell Cycle ProteinsDNAQuercetinTranscription FactorsAnticancerChem-seqPolyphenolQuercetinRNA-seq

Identifiers

PMID31337340
PMCPMC6652105
OpenAlexW2963166495

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.