Evidence map›Paper›PMID 31333643›Full record

ArticleFrontiers in immunology2019

Contrasting Gene Expression Profiles of Monocytes and Lymphocytes From Peste-Des-Petits-Ruminants Virus Infected Goats.

Sajad Ahmad Wani, Amit Ranjan Sahu, Raja Ishaq Nabi Khan, Aruna Pandey, Shikha Saxena, Neelima Hosamani, Waseem Akram Malla, Dheeraj Chaudhary, Sonam Kanchan, Vaishali Sah and 10 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
5.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 23 citations in OpenAlex.

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  7. Changes in mHeliyon · 2023
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  12. Peste des Petits Ruminants Virus Exhibits Cell-Dependent Interferon Active Response.Frontiers in cellular and infection microbiology · 2022
    Article
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 2 institutions in 2 countries.

Sajad Ahmad WaniDivision of Veterinary Biotechnology, ICAR-Indian Veterinary Research Institute (IVRI), Bareilly, India.
Amit Ranjan SahuDivision of Veterinary Biotechnology, ICAR-Indian Veterinary Research Institute (IVRI), Bareilly, India.
Raja Ishaq Nabi KhanDivision of Veterinary Biotechnology, ICAR-Indian Veterinary Research Institute (IVRI), Bareilly, India.
Aruna PandeyDivision of Veterinary Biotechnology, ICAR-Indian Veterinary Research Institute (IVRI), Bareilly, India.
Shikha SaxenaDivision of Veterinary Biotechnology, ICAR-Indian Veterinary Research Institute (IVRI), Bareilly, India.
Neelima HosamaniGenomics and Computational Biology, DBT-National Institute of Animal Biotechnology, Hyderabad, India.
Waseem Akram MallaDivision of Veterinary Biotechnology, ICAR-Indian Veterinary Research Institute (IVRI), Bareilly, India.
Dheeraj ChaudharyDivision of Virology, ICAR-Indian Veterinary Research Institute (IVRI), Mukteswar, India.
Sonam KanchanDivision of Veterinary Biotechnology, ICAR-Indian Veterinary Research Institute (IVRI), Bareilly, India.
Vaishali SahDivision of Animal Genetics and Breeding, ICAR-Indian Veterinary Research Institute (IVRI), Bareilly, India.
Kaushal Kishor RajakDivision of Biological Products, ICAR-Indian Veterinary Research Institute, Bareilly, India.
D MuthuchelvanDivision of Virology, ICAR-Indian Veterinary Research Institute (IVRI), Mukteswar, India.
Bina MishraDivision of Biological Products, ICAR-Indian Veterinary Research Institute, Bareilly, India.
Ashok Kumar TiwariDivision of Biological Standardization, ICAR-Indian Veterinary Research Institute, Bareilly, India.
Aditya P SahooICAR- Directorate of Foot and Mouth Disease, Mukteswar, India.
Basavaraj SajjanarDivision of Veterinary Biotechnology, ICAR-Indian Veterinary Research Institute (IVRI), Bareilly, India.
Yash Pal SinghARIS Cell, ICAR-Indian Veterinary Research Institute (IVRI), Bareilly, India.
Ravi Kumar GandhamDivision of Veterinary Biotechnology, ICAR-Indian Veterinary Research Institute (IVRI), Bareilly, India.
Bishnu Prasad MishraDivision of Veterinary Biotechnology, ICAR-Indian Veterinary Research Institute (IVRI), Bareilly, India.
Raj Kumar SinghDivision of Veterinary Biotechnology, ICAR-Indian Veterinary Research Institute (IVRI), Bareilly, India.
Indian Veterinary Research Institute · INNational Institute of Animal Biotechnology · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this study, transcriptome analysis of PPRV infected PBMC subsets-T helper cells, T cytotoxic cells, monocytes, and B lymphocytes was done to delineate their role in host response. PPRV was found to infect lymphocytes and not monocytes. The established receptor for PPRV-SLAM was found downregulated in lymphocytes and non-differentially expressed in monocytes. A profound deviation in the global gene expression profile with a large number of unique upregulated genes (851) and downregulated genes (605) was observed in monocytes in comparison to lymphocytes. ISGs-ISG15, Mx1, Mx2, RSAD2, IFIT3, and IFIT5 that play a role in antiviral response and the genes for viral sensors-MDA5, LGP2, and RIG1, were found to be upregulated in lymphocytes and downregulated in monocytes. The transcription factors-IRF-7 and STAT-1 that regulate expression of most of the ISGs were found activated in lymphocytes and not in monocytes. Interferon signaling pathway and RIG1 like receptor signaling pathway were found activated in lymphocytes and not in monocytes. This contrast in gene expression profiles and signaling pathways indicated the predominant role of lymphocytes in generating the antiviral response against PPRV in goats, thus, giving us new insights into host response to PPRV.

Indexed as

AnimalsB-LymphocytesGene Expression ProfilingGoat DiseasesGoatsHost-Pathogen InteractionsMonocytesPeste-des-Petits-RuminantsPeste-des-petits-ruminants virusSignaling Lymphocytic Activation Molecule Family Member 1T-Lymphocytes, CytotoxicT-Lymphocytes, Helper-InducerSignaling Lymphocytic Activation Molecule Family Member 1goathost-pathogen interactionlymphocytesmonocytesPPRVRNA sequencing

Identifiers

PMID31333643
PMCPMC6624447
OpenAlexW2955685035

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.