Evidence map›Paper›PMID 31332718›Full record

ArticleJournal of applied genetics2019

Detection of QTLs associated with mungbean yellow mosaic virus (MYMV) resistance using the interspecific cross of Vigna radiata × Vigna umbellata.

Mayalagu Kanimoli Mathivathana, Jayakodi Murukarthick, Adhimoolam Karthikeyan, Woojong Jang, Manickam Dhasarathan, Nallathambi Jagadeeshselvam, Manickam Sudha, Chocklingam Vanniarajan, Gandhi Karthikeyan, Tae-Jin Yang and 3 more

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Article in Journal of applied genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers, 1 of them a synthesis that pooled it.

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0cells of the map it votes in
23citing papers in PubMed, 1 pooled it
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

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3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  10. De Novo Transcriptome Assembly of Rice Bean (Plants (Basel, Switzerland) · 2024
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  14. Consensus genetic map and QTLs for morphological and agronomical traits in mungbean using DArT markers.Physiology and molecular biology of plants : an international journal of functional plant biology · 2022
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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

13 authors.

Mayalagu Kanimoli MathivathanaDepartment of Plant Breeding and Genetics, Agricultural College and Research Institute, Tamil Nadu Agricultural University, Madurai, Tamil Nadu, India.
Jayakodi MurukarthickLeibniz Institute of Plant Genetics and Crop Plant Research (IPK Gatersleben), Corrensstrasse 3, 06466, Seeland, Germany.
Adhimoolam KarthikeyanDepartment of Biotechnology, Agricultural College and Research Institute, Tamil Nadu Agricultural University, Madurai, Tamil Nadu, India.
Woojong JangDepartment of Plant Science, Plant Genomics and Breeding Institute, Research Institute for Agriculture and Life Sciences, College of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea.
Manickam DhasarathanDepartment of Biotechnology, Agricultural College and Research Institute, Tamil Nadu Agricultural University, Madurai, Tamil Nadu, India.
Nallathambi JagadeeshselvamDepartment of Plant Biotechnology, Center for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore, Tamil Nadu, India.
Manickam SudhaDepartment of Plant Biotechnology, Center for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore, Tamil Nadu, India.
Chocklingam VanniarajanDepartment of Plant Breeding and Genetics, Agricultural College and Research Institute, Tamil Nadu Agricultural University, Madurai, Tamil Nadu, India.
Gandhi KarthikeyanDepartment of Plant Pathology, Center for Plant Protection Studies, Tamil Nadu Agricultural University, Coimbatore, Tamil Nadu, India.
Tae-Jin YangDepartment of Plant Science, Plant Genomics and Breeding Institute, Research Institute for Agriculture and Life Sciences, College of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea.
Muthurajan RaveendranDepartment of Plant Biotechnology, Center for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore, Tamil Nadu, India.
Muthaiyan PandiyanAgricultural College and Research Institute, Tamil Nadu Agricultural University, Eachangkottai, Thanjavur, Tamil Nadu, India. mpandiyan8@yahoo.co.in.
Natesan SenthilDepartment of Biotechnology, Agricultural College and Research Institute, Tamil Nadu Agricultural University, Madurai, Tamil Nadu, India. senthil_natesan@tnau.ac.in.ORCID http://orcid.org/0000-0002-2930-0715

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mungbean (Vigna radiata) and ricebean (V. umbellata) were utilized to obtain an inter-specific recombinant inbred line (RIL) population with the objective of detecting quantitative trait loci (QTL) associated with mungbean yellow mosaic virus (MYMV) resistance. To precisely map QTLs, accurate genetic linkage maps are essential. In the present study, genotyping-by-sequencing (GBS) platform was utilized to develop the genetic linkage map. The map contained 538 single nucleotide polymorphism (SNP) markers, consisted of 11 linkage groups and spanned for 1291.7 cM with an average marker distance of 2.40 cM. The individual linkage group ranged from 90.2 to 149.1 cM in length, and the SNP markers were evenly distributed in the genetic linkage map, with 30-79 SNP markers per chromosome. The QTL analysis using the genetic map and 2 years (2015 and 2016) of phenotyping data identified five QTLs with phenotypic variation explained (PVE) from 10.11 to 20.04%. Of these, a QTL on chromosome 4, designated as qMYMV4-1, was major and stably detected in the same marker interval in both years. This QTL region harbours possible candidate genes for controlling MYMV resistance. The linkage map and QTL/gene (s) for MYMV resistance identified in this study should be useful for QTL fine mapping and cloning for further studies.

Indexed as

BegomovirusChromosome MappingDisease ResistanceGenetic LinkageMicrosatellite RepeatsPhenotypePlant DiseasesPolymorphism, Single NucleotideQuantitative Trait LociVignaGenotyping by sequencingInterspecific hybridizationMungbeanMungbean yellow mosaic virusRicebeanSingle nucleotide polymorphism

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.