ArticleNature genetics2019
Inflated performance measures in enhancer-promoter interaction-prediction methods.
Article in Nature genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
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Who cites it
27 citing papers in PubMed.
- CRM-TI: an enhanced pipeline for computationally assigning the target genes of cis-regulatory modules by considering comprehensive long-range regulation mechanisms.BioData mining · 2026Article
- UniChrom: a universal deep learning architecture for cross-scale chromatin interaction prediction.BMC genomics · 2026Article
- EPIFBMC: A New Model for Enhancer-Promoter Interaction Prediction.International journal of molecular sciences · 2025Article
- Class-balanced negative training sets for improving classifier model predictions of enhancer-promoter interactions.BMC bioinformatics · 2025Article
- Non-local modeling of enhancer-promoter interactions, a correspondence on "LOCO-EPI: Leave-one-chromosome-out (LOCO) as a benchmarking paradigm for deep learning based prediction of enhancer-promoter interactions".Applied intelligence (Dordrecht, Netherlands) · 2025Article
- A novel deep learning framework with dynamic tokenization for identifying chromatin interactions along with motif importance investigation.Briefings in bioinformatics · 2025Article
- Review
- CENTRE: a gradient boosting algorithm for Cell-type-specific ENhancer-Target pREdiction.Bioinformatics (Oxford, England) · 2023Article
- LncRNA-protein interaction prediction with reweighted feature selection.BMC bioinformatics · 2023Article
- Doppelgänger spotting in biomedical gene expression data.iScience · 2022Article
- EPIXplorer: A web server for prediction, analysis and visualization of enhancer-promoter interactions.Nucleic acids research · 2022Article
- Navigating the pitfalls of applying machine learning in genomics.Nature reviews. Genetics · 2022Review
- A systematic study of motif pairs that may facilitate enhancer-promoter interactions.Journal of integrative bioinformatics · 2022Article
- regCNN: identifyingComputational and structural biotechnology journal · 2022Article
- Indicators of Successful Career Transitions from Physical Sciences and Engineering to Biomedical Research.Current genomics · 2021Article
- Chromatin loop anchors predict transcript and exon usage.Briefings in bioinformatics · 2021Article
- Predict long-range enhancer regulation based on protein-protein interactions between transcription factors.Nucleic acids research · 2021Article
- Leveraging three-dimensional chromatin architecture for effective reconstruction of enhancer-target gene regulatory interactions.Nucleic acids research · 2021Article
- Computational methods for the prediction of chromatin interaction and organization using sequence and epigenomic profiles.Briefings in bioinformatics · 2021Article
- Loop competition and extrusion model predicts CTCF interaction specificity.Nature communications · 2021Article
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Authors and funding
2 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
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Identifiers
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.