Evidence map›Paper›PMID 31332182›Full record

ArticleNature communications2019

Integrated analyses of murine breast cancer models reveal critical parallels with human disease.

Jonathan P Rennhack, Briana To, Matthew Swiatnicki, Caleb Dulak, Martin P Ogrodzinski, Yueqi Zhang, Caralynn Li, Evan Bylett, Christina Ross, Karol Szczepanek and 5 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
3.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 66 citations in OpenAlex.

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  14. SMARCD1 is a "Goldilocks" metastasis modifier.bioRxiv : the preprint server for biology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 1 country.

Jonathan P RennhackDepartment of Physiology, Michigan State University, East Lansing, MI, 48824, USA.
Briana ToDepartment of Physiology, Michigan State University, East Lansing, MI, 48824, USA.
Matthew SwiatnickiDepartment of Physiology, Michigan State University, East Lansing, MI, 48824, USA.
Caleb DulakDepartment of Physiology, Michigan State University, East Lansing, MI, 48824, USA.
Martin P OgrodzinskiDepartment of Physiology, Michigan State University, East Lansing, MI, 48824, USA.
Yueqi ZhangDepartment of Physiology, Michigan State University, East Lansing, MI, 48824, USA.
Caralynn LiDepartment of Physiology, Michigan State University, East Lansing, MI, 48824, USA.
Evan BylettDepartment of Physiology, Michigan State University, East Lansing, MI, 48824, USA.
Christina RossDepartment of Chemical Engineering and Materials Science, Michigan State University, East Lansing, MI, 48824, USA.
Karol SzczepanekDepartment of Chemical Engineering and Materials Science, Michigan State University, East Lansing, MI, 48824, USA.
William HanrahanDepartment of Physiology, Michigan State University, East Lansing, MI, 48824, USA.
Muthu JayatissaDepartment of Physiology, Michigan State University, East Lansing, MI, 48824, USA.
Sophia Y LuntDepartment of Biochemistry and Molecular Biology, Michigan State University, East Lansing, MI, 48824, USA.ORCID http://orcid.org/0000-0003-4522-6065
Kent HunterLaboratory of Cancer Biology and Genetics, National Cancer Institute, National Institutes of Health, Bethesda, MD, 20892, USA.ORCID http://orcid.org/0000-0001-5963-8808
Eran R AndrechekDepartment of Physiology, Michigan State University, East Lansing, MI, 48824, USA. andrech1@msu.edu.
Michigan State University · USNational Institutes of Health · US

Funding

Dissecting Tumor Heterogeneity by Analyzing Signaling Pathway Requirements.R01CA160514 · NCI · MICHIGAN STATE UNIVERSITY · PI ANDRECHEK, ERAN ROBERT · 2012 to 2016
$1.5M
The Role of E2F2 in HER2 Positive Breast CancerK00CA212221 · NCI · DANA-FARBER CANCER INST · PI RENNHACK, JONATHAN · 2018 to 2021
$366k
The Role of E2F2 in HER2 Positive Breast CancerF99CA212221 · NCI · MICHIGAN STATE UNIVERSITY · PI RENNHACK, JONATHAN · 2016 to 2017
$85k
NCI NIH HHS F99 CA212221NCI NIH HHS K00 CA212221NCI NIH HHS R01 CA160514
6 · The paper itself

Abstract

Mouse models have an essential role in cancer research, yet little is known about how various models resemble human cancer at a genomic level. Here, we complete whole genome sequencing and transcriptome profiling of two widely used mouse models of breast cancer, MMTV-Neu and MMTV-PyMT. Through integrative in vitro and in vivo studies, we identify copy number alterations in key extracellular matrix proteins including collagen 1 type 1 alpha 1 (COL1A1) and chondroadherin (CHAD) that drive metastasis in these mouse models. In addition to copy number alterations, we observe a propensity of the tumors to modulate tyrosine kinase-mediated signaling through mutation of phosphatases such as PTPRH in the MMTV-PyMT mouse model. Mutation in PTPRH leads to increased phospho-EGFR levels and decreased latency. These findings underscore the importance of understanding the complete genomic landscape of a mouse model and illustrate the utility this has in understanding human cancers.

Indexed as

Disease Models, AnimalGene Expression Regulation, NeoplasticAnimalsBreast NeoplasmsCell Line, TumorCollagen Type ICollagen Type I, alpha 1 ChainExtracellular Matrix ProteinsFemaleGene Expression ProfilingHumansMammary Neoplasms, AnimalMammary Neoplasms, ExperimentalMiceMutationchondroadherinCollagen Type ICollagen Type I, alpha 1 ChainExtracellular Matrix Proteins

Identifiers

PMID31332182
PMCPMC6646342
OpenAlexW2964233382

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.